RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 PSMA8Q8TAA3 256 aa12.63□□□□□ -0.39
HCFC1-202ENST00000369984 MAGEC3Q8TD91 643 aa12.63□□□□□ -0.39
HCFC1-202ENST00000369984 KLHL32Q96NJ5 620 aa12.63□□□□□ -0.39
HCFC1-202ENST00000369984 KCNK4Q9NYG8 393 aa12.63□□□□□ -0.39
HCFC1-202ENST00000369984 MGAT4AQ9UM21 535 aa12.63□□□□□ -0.39
HCFC1-202ENST00000369984 TEX46H3BTG2 121 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 TRDMT1O14717 391 aaKnown RBP12.62□□□□□ -0.39
HCFC1-202ENST00000369984 ZBTB14O43829 449 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 SEC24AO95486 1093 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 TFRCP02786 760 aaKnown RBP12.62□□□□□ -0.39
HCFC1-202ENST00000369984 ATP4AP20648 1035 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 IFI35P80217 286 aaPredicted RBP12.62□□□□□ -0.39
HCFC1-202ENST00000369984 PTPN11Q06124 597 aaPredicted RBP12.62□□□□□ -0.39
HCFC1-202ENST00000369984 PFKFB4Q16877 469 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 PYHIN1Q6K0P9 492 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 SYT12Q8IV01 421 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 MYLPFQ96A32 169 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 KIAA1683Q9H0B3 1180 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 VPS45Q9NRW7 570 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 TMEM216Q9P0N5 145 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 C15orf38-AP3S2A0A0A6YYH1 394 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 SKP1P63208 163 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 SETMARQ53H47 684 aaPredicted RBP12.62□□□□□ -0.39
HCFC1-202ENST00000369984 R3HCC1LQ7Z5L2 792 aaKnown RBP12.62□□□□□ -0.39
HCFC1-202ENST00000369984 ARPINQ7Z6K5 226 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 MYDGFQ969H8 173 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 REXO5Q96IC2 774 aaKnown RBP12.62□□□□□ -0.39
HCFC1-202ENST00000369984 CRAMP1Q96RY5 1269 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 MTG1Q9BT17 334 aaPredicted RBP12.62□□□□□ -0.39
HCFC1-202ENST00000369984 CCDC177Q9NQR7 707 aaPredicted RBP12.62□□□□□ -0.39
HCFC1-202ENST00000369984 RPS6KA6Q9UK32 745 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 SETBP1Q9Y6X0 1596 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 MGRN1O60291 552 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 POLD2P49005 469 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 TUBP50607 506 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 CLCN3P51790 818 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 SREBF2Q12772 1141 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 ILF2Q12905 390 aaKnown RBP12.62□□□□□ -0.39
HCFC1-202ENST00000369984 SPIDRQ14159 915 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 QPRTQ15274 297 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 SLC9A6Q92581 669 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 CYP3A43Q9HB55 503 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 TSPAN16Q9UKR8 245 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 CHRNGP07510 517 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 MTA1Q13330 715 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 SCUBE3Q8IX30 993 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 AMER2Q8N7J2 671 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 GGA3Q9NZ52 723 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 AP3M1Q9Y2T2 418 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 TCEA3O75764 348 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 EPORP19235 508 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 CASP5P51878 434 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 TBX4P57082 545 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 LAMTOR4Q0VGL1 99 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 IRGCQ6NXR0 463 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 RD3Q7Z3Z2 195 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 GLT1D1Q96MS3 346 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 SLC38A2Q96QD8 506 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 SLC25A23Q9BV35 468 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 HACL1Q9UJ83 578 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 SPATA31A3Q5VYP0 1347 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 VAPBO95292 243 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 FAM153BP0C7A2 387 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 SMCO1Q147U7 214 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 FAM153CQ494X1 144 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 ZNF720Q7Z2F6 126 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 DNAAF5Q86Y56 855 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 ZDHHC17Q8IUH5 632 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 TCAIMQ8N3R3 496 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 TRMT13Q9NUP7 481 aaKnown RBP12.62□□□□□ -0.39
HCFC1-202ENST00000369984 NDOR1Q9UHB4 597 aa12.62□□□□□ -0.39
HCFC1-202ENST00000369984 SUPT20HL2P0C7V6 817 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 ARL3P36405 182 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 HSF2Q03933 536 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 SLC5A5Q92911 643 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 CDHR5Q9HBB8 845 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 DDX43Q9NXZ2 648 aaKnown RBP12.61□□□□□ -0.39
HCFC1-202ENST00000369984 ATXN2Q99700 1313 aaKnown RBP12.61□□□□□ -0.39
HCFC1-202ENST00000369984 KPNA6O60684 536 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 MTA2O94776 668 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 PRLP01236 227 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 PREPLQ4J6C6 727 aaPredicted RBP12.61□□□□□ -0.39
HCFC1-202ENST00000369984 MCOLN2Q8IZK6 566 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 EEF1AKMT1Q8WVE0 214 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 SMARCD1Q96GM5 515 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 MRPS7Q9Y2R9 242 aaKnown RBP12.61□□□□□ -0.39
HCFC1-202ENST00000369984 FDPSP14324 419 aaKnown RBP12.61□□□□□ -0.39
HCFC1-202ENST00000369984 GCLCP48506 637 aaPredicted RBP12.61□□□□□ -0.39
HCFC1-202ENST00000369984 COPZ1P61923 177 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 ZIK1Q3SY52 487 aaPredicted RBP12.61□□□□□ -0.39
HCFC1-202ENST00000369984 PANX3Q96QZ0 392 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 TRHDEQ9UKU6 1024 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 CDH9Q9ULB4 789 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 MAPRE3Q9UPY8 281 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 PCDHA11Q9Y5I1 949 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 ACSL4O60488 711 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 PRKAR1AP10644 381 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 FBXO47Q5MNV8 452 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 POC5Q8NA72 575 aa12.61□□□□□ -0.39
HCFC1-202ENST00000369984 TAS1R2Q8TE23 839 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms