RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 HSPB11Q9Y547 144 aa8.69□□□□□ -1.02
LCA5-201ENST00000369846 A0A1W2PPM1 405 aa8.69□□□□□ -1.02
LCA5-201ENST00000369846 ISPDA4D126 451 aa8.69□□□□□ -1.02
LCA5-201ENST00000369846 FOXO6A8MYZ6 492 aa8.69□□□□□ -1.02
LCA5-201ENST00000369846 CD3EAPO15446 510 aaKnown RBP8.69□□□□□ -1.02
LCA5-201ENST00000369846 EXTL3O43909 919 aa8.69□□□□□ -1.02
LCA5-201ENST00000369846 KPNA6O60684 536 aa8.69□□□□□ -1.02
LCA5-201ENST00000369846 SNX4O95219 450 aa8.69□□□□□ -1.02
LCA5-201ENST00000369846 MT-ND1P03886 318 aa8.69□□□□□ -1.02
LCA5-201ENST00000369846 RLN1P04808 185 aa8.69□□□□□ -1.02
LCA5-201ENST00000369846 YES1P07947 543 aa8.69□□□□□ -1.02
LCA5-201ENST00000369846 GPD1P21695 349 aa8.69□□□□□ -1.02
LCA5-201ENST00000369846 NEK3P51956 506 aa8.69□□□□□ -1.02
LCA5-201ENST00000369846 SCARF1Q14162 830 aa8.69□□□□□ -1.02
LCA5-201ENST00000369846 SMCO1Q147U7 214 aa8.69□□□□□ -1.02
LCA5-201ENST00000369846 GRM4Q14833 912 aa8.69□□□□□ -1.02
LCA5-201ENST00000369846 SNAPC1Q16533 368 aa8.69□□□□□ -1.02
LCA5-201ENST00000369846 GARNL3Q5VVW2 1013 aa8.69□□□□□ -1.02
LCA5-201ENST00000369846 C11orf96Q7Z7L8 435 aa8.69□□□□□ -1.02
LCA5-201ENST00000369846 C12orf56Q8IXR9 622 aa8.69□□□□□ -1.02
LCA5-201ENST00000369846 WDR48Q8TAF3 677 aa8.69□□□□□ -1.02
LCA5-201ENST00000369846 MYDGFQ969H8 173 aa8.69□□□□□ -1.02
LCA5-201ENST00000369846 CEP295NLQ96MC4 621 aa8.69□□□□□ -1.02
LCA5-201ENST00000369846 NMRAL1Q9HBL8 299 aa8.69□□□□□ -1.02
LCA5-201ENST00000369846 PHF11Q9UIL8 331 aa8.69□□□□□ -1.02
LCA5-201ENST00000369846 ZNF232Q9UNY5 417 aa8.69□□□□□ -1.02
LCA5-201ENST00000369846 AKAP12Q02952 1782 aa8.69□□□□□ -1.02
LCA5-201ENST00000369846 CNTRLQ7Z7A1 2325 aa8.69□□□□□ -1.02
LCA5-201ENST00000369846 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.68□□□□□ -1.02
LCA5-201ENST00000369846 ATP6AP2A0A1C7CYW4 349 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 KATNA1O75449 491 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 ATP6AP2O75787 350 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 VAPBO95292 243 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 SNRPB2P08579 225 aaKnown RBP8.68□□□□□ -1.02
LCA5-201ENST00000369846 GZMAP12544 262 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 CYP11B1P15538 503 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 PSMA3P25788 255 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 PHKA2P46019 1235 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 RFX3P48380 749 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 CEBPGP53567 150 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 MYBPC1Q00872 1141 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 DNASE1L3Q13609 305 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 QRICH1Q2TAL8 776 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 KLHL24Q6TFL4 600 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 KYAT3Q6YP21 454 aaKnown RBP8.68□□□□□ -1.02
LCA5-201ENST00000369846 KCTD8Q6ZWB6 473 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 CBR4Q8N4T8 237 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 PDPRQ8NCN5 879 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 MED15Q96RN5 788 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 ACOX2Q99424 681 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 CHCHD6Q9BRQ6 235 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 MRPL9Q9BYD2 267 aaKnown RBP8.68□□□□□ -1.02
LCA5-201ENST00000369846 SLC6A15Q9H2J7 730 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 TAS2R1Q9NYW7 299 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 PTGFRNQ9P2B2 879 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 NRXN3Q9Y4C0 1643 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 CES2O00748 559 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 TEX28O15482 410 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 DDX3YO15523 660 aaKnown RBP8.68□□□□□ -1.02
LCA5-201ENST00000369846 PGK1P00558 417 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 LBPP18428 481 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 CDH15P55291 814 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 HERC3Q15034 1050 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 MEA1Q16626 185 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 SWSAP1Q6NVH7 229 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 ANKS3Q6ZW76 656 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 P2RY8Q86VZ1 359 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 LARGE2Q8N3Y3 721 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 TRPV1Q8NER1 839 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 POLR3FQ9H1D9 316 aaPredicted RBP8.68□□□□□ -1.02
LCA5-201ENST00000369846 EXD2Q9NVH0 621 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 UBP1Q9NZI7 540 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 SSR3Q9UNL2 185 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 INVSQ9Y283 1065 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 ABCB11O95342 1321 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 PRAMEF33A0A0G2JMD5 474 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 AP3D1O14617 1153 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 PRAMEF10O60809 474 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 PEX11AO75192 247 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 LYPLA1O75608 230 aaPredicted RBP8.68□□□□□ -1.02
LCA5-201ENST00000369846 OR6B1O95007 311 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 CST1P01037 141 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 CLTBP09497 229 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 CHI3L1P36222 383 aaPredicted RBP8.68□□□□□ -1.02
LCA5-201ENST00000369846 CAPGP40121 348 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 SIM2Q14190 667 aaPredicted RBP8.68□□□□□ -1.02
LCA5-201ENST00000369846 PDIA6Q15084 440 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 UAP1L1Q3KQV9 507 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 DCAF6Q58WW2 860 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 ZRANB3Q5FWF4 1079 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 WDR45BQ5MNZ6 344 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 CYP4Z1Q86W10 505 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 CYP4Z2PQ8N1L4 340 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 ZCCHC9Q8N567 271 aaKnown RBP8.68□□□□□ -1.02
LCA5-201ENST00000369846 CEP41Q9BYV8 373 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 SAV1Q9H4B6 383 aaPredicted RBP8.68□□□□□ -1.02
LCA5-201ENST00000369846 EIF3KQ9UBQ5 218 aaKnown RBP8.68□□□□□ -1.02
LCA5-201ENST00000369846 GNPTGQ9UJJ9 305 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 CLEC4AQ9UMR7 237 aa8.68□□□□□ -1.02
LCA5-201ENST00000369846 PRPF19Q9UMS4 504 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 487.1 ms