RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 C6orf89Q6UWU4 347 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 APBA2Q99767 749 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 ELOVL6Q9H5J4 265 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 LEF1Q9UJU2 399 aaPredicted RBP11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 VCLP18206 1134 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 GTF2H3Q13889 308 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 C8orf59Q8N0T1 100 aaPredicted RBP11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 TRIM63Q969Q1 353 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 APOL2Q9BQE5 337 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 TMEM245Q9H330 911 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 PARVBQ9HBI1 364 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 PNPLA8Q9NP80 782 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 SCUBE2Q9NQ36 999 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 ELAVL2Q12926 359 aaKnown RBP11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 ZDHHC24Q6UX98 284 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 FBXO16Q8IX29 292 aaPredicted RBP11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 NKAPQ8N5F7 415 aaKnown RBP11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 ITFG1Q8TB96 612 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 C18orf25Q96B23 403 aaPredicted RBP11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 SNX15Q9NRS6 342 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 COL1A2P08123 1366 aa11.97□□□□□ -0.49
CDC42BPA-202ENST00000366764 SP100P23497 879 aaPredicted RBP11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 TRAF2Q12933 501 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 HIST2H2ACQ16777 129 aaPredicted RBP11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 HIST2H2AA3Q6FI13 130 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 SMIM5Q71RC9 77 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 FAM120BQ96EK7 910 aaKnown RBP11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 SLC17A7Q9P2U7 560 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 AFF4Q9UHB7 1163 aaKnown RBP11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 AP4B1Q9Y6B7 739 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 PDZK1P1A8MUH7 402 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 RAMP2O60895 175 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 OXCT1P55809 520 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 UBAP2LQ14157 1087 aaKnown RBP11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 AMHR2Q16671 573 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 PGAM4Q8N0Y7 254 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 TMEM132CQ8N3T6 1108 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 DHRS12A0PJE2 317 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 GRIK4Q16099 956 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 LIN52Q52LA3 116 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 STRADAQ7RTN6 431 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 POMKQ9H5K3 350 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 TMCC3Q9ULS5 477 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 HOXD10P28358 340 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 SNRNP27Q8WVK2 155 aaKnown RBP11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 CPT1BQ92523 772 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 WDR12Q9GZL7 423 aaKnown RBP11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 C3orf18Q9UK00 162 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 V9GYQ6 96 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 ROBO1Q9Y6N7 1651 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 H0YGN5 161 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 DYNC1LI2O43237 492 aaPredicted RBP11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 ALDH1A1P00352 501 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 VAV1P15498 845 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 YY1P25490 414 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 GTF2A2P52657 109 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 ZBTB45Q96K62 511 aaPredicted RBP11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 CDH22Q9UJ99 828 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 NFS1Q9Y697 457 aa11.96□□□□□ -0.49
CDC42BPA-202ENST00000366764 ASNA1O43681 348 aa11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 BNIP3LO60238 219 aa11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 ACTR3P61158 418 aa11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 SLC1A5Q15758 541 aa11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 FBXO32Q969P5 355 aa11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 SH3KBP1Q96B97 665 aa11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 HOPXQ9BPY8 73 aaPredicted RBP11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 USP20Q9Y2K6 914 aa11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 WNT10BO00744 389 aa11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 HLA-DPA1P20036 260 aa11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 CLCN2P51788 898 aa11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 PKN3Q6P5Z2 889 aa11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 PNPT1Q8TCS8 783 aaKnown RBP11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 VAC14Q08AM6 782 aa11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 ZC3H12BQ5HYM0 836 aaKnown RBP11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 UNC5AQ6ZN44 842 aa11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 CCDC81Q6ZN84 652 aa11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 ILDR2Q71H61 639 aa11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 ALYREFQ86V81 257 aaKnown RBP11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 TBC1D21Q8IYX1 336 aa11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 EMILIN2Q9BXX0 1053 aa11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 OSBPL6Q9BZF3 934 aa11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 TMEM216Q9P0N5 145 aa11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 COPG1Q9Y678 874 aaKnown RBP11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 IGLV3-22A0A075B6J6 115 aa11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 ADSSP30520 456 aa11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 NDNQ99608 321 aa11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 CCNB1IP1Q9NPC3 277 aa11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 KRCC1Q9NPI7 259 aaPredicted RBP11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 DDX43Q9NXZ2 648 aaKnown RBP11.96□□□□□ -0.5
CDC42BPA-202ENST00000366764 YBX3P16989 372 aaKnown RBP eCLIP11.95□□□□□ -0.51e-6■■□□□ 12.3
CDC42BPA-202ENST00000366764 CHRNB2P17787 502 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 DEFB106AQ8N104 65 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 FNDC5Q8NAU1 212 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 BORCS5Q969J3 196 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 LENG9Q96B70 501 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 PAIP1Q9H074 479 aaKnown RBP11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 STMN3Q9NZ72 180 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 STK39Q9UEW8 545 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 OR12D3Q9UGF7 316 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 RTN3O95197 1032 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms