RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 MRM3Q9HC36 420 aaKnown RBP18.02■□□□□ 0.47
RTN4-204ENST00000357732 EPS15L1Q9UBC2 864 aa18.02■□□□□ 0.47
RTN4-204ENST00000357732 TUBGCP4Q9UGJ1 667 aa18.02■□□□□ 0.47
RTN4-204ENST00000357732 AP4B1Q9Y6B7 739 aa18.02■□□□□ 0.47
RTN4-204ENST00000357732 ARHGAP10A1A4S6 786 aa18.01■□□□□ 0.47
RTN4-204ENST00000357732 PIRO00625 290 aa18.01■□□□□ 0.47
RTN4-204ENST00000357732 XPOTO43592 962 aaKnown RBP18.01■□□□□ 0.47
RTN4-204ENST00000357732 GRIA4P48058 902 aa18.01■□□□□ 0.47
RTN4-204ENST00000357732 NSUN2Q08J23 767 aaKnown RBP eCLIP18.01■□□□□ 0.47
RTN4-204ENST00000357732 PABPC1LQ4VXU2 614 aaKnown RBP18.01■□□□□ 0.47
RTN4-204ENST00000357732 DCAF6Q58WW2 860 aa18.01■□□□□ 0.47
RTN4-204ENST00000357732 ARMC3Q5W041 872 aa18.01■□□□□ 0.47
RTN4-204ENST00000357732 EGFL6Q8IUX8 553 aa18.01■□□□□ 0.47
RTN4-204ENST00000357732 SLC2A14Q8TDB8 520 aa18.01■□□□□ 0.47
RTN4-204ENST00000357732 FAM149B1Q96BN6 582 aa18.01■□□□□ 0.47
RTN4-204ENST00000357732 AGAP2Q99490 1192 aa18.01■□□□□ 0.47
RTN4-204ENST00000357732 HNRNPABQ99729 332 aaKnown RBP18.01■□□□□ 0.47
RTN4-204ENST00000357732 C1QTNF1Q9BXJ1 281 aa18.01■□□□□ 0.47
RTN4-204ENST00000357732 LZTS1Q9Y250 596 aa18.01■□□□□ 0.47
RTN4-204ENST00000357732 POLR2AP24928 1970 aaKnown RBP18.01■□□□□ 0.47
RTN4-204ENST00000357732 GRID2O43424 1007 aa18.01■□□□□ 0.47
RTN4-204ENST00000357732 TMCC1O94876 653 aa18.01■□□□□ 0.47
RTN4-204ENST00000357732 LTFP02788 710 aa18.01■□□□□ 0.47
RTN4-204ENST00000357732 MPSTP25325 297 aa18.01■□□□□ 0.47
RTN4-204ENST00000357732 IRF9Q00978 393 aa18.01■□□□□ 0.47
RTN4-204ENST00000357732 SLC12A1Q13621 1099 aa18.01■□□□□ 0.47
RTN4-204ENST00000357732 TMEM151AQ8N4L1 468 aa18.01■□□□□ 0.47
RTN4-204ENST00000357732 B4GALNT2Q8NHY0 566 aa18.01■□□□□ 0.47
RTN4-204ENST00000357732 FAM81AQ8TBF8 368 aa18.01■□□□□ 0.47
RTN4-204ENST00000357732 DUSP16Q9BY84 665 aa18.01■□□□□ 0.47
RTN4-204ENST00000357732 CEP41Q9BYV8 373 aa18.01■□□□□ 0.47
RTN4-204ENST00000357732 TASP1Q9H6P5 420 aa18.01■□□□□ 0.47
RTN4-204ENST00000357732 WDR41Q9HAD4 459 aa18.01■□□□□ 0.47
RTN4-204ENST00000357732 LRRC4Q9HBW1 653 aa18.01■□□□□ 0.47
RTN4-204ENST00000357732 C20orf96Q9NUD7 363 aaPredicted RBP18.01■□□□□ 0.47
RTN4-204ENST00000357732 SNTG2Q9NY99 539 aa18.01■□□□□ 0.47
RTN4-204ENST00000357732 MCM3APO60318 1980 aa18■□□□□ 0.47
RTN4-204ENST00000357732 TRPC5OSA6NMA1 111 aa18■□□□□ 0.47
RTN4-204ENST00000357732 PIGNO95427 931 aa18■□□□□ 0.47
RTN4-204ENST00000357732 ASLP04424 464 aa18■□□□□ 0.47
RTN4-204ENST00000357732 FAM163BP0C2L3 166 aa18■□□□□ 0.47
RTN4-204ENST00000357732 ZNF286BP0CG31 522 aa18■□□□□ 0.47
RTN4-204ENST00000357732 SRGAP2BP0DMP2 458 aa18■□□□□ 0.47
RTN4-204ENST00000357732 ZNF33AQ06730 810 aa18■□□□□ 0.47
RTN4-204ENST00000357732 SEMA3BQ13214 749 aa18■□□□□ 0.47
RTN4-204ENST00000357732 ART3Q13508 389 aa18■□□□□ 0.47
RTN4-204ENST00000357732 LARP7Q4G0J3 582 aaKnown RBP eCLIP18■□□□□ 0.472e-6■■□□□ 11.4
RTN4-204ENST00000357732 ARL13AQ5H913 290 aaPredicted RBP18■□□□□ 0.47
RTN4-204ENST00000357732 NAPEPLDQ6IQ20 393 aa18■□□□□ 0.47
RTN4-204ENST00000357732 MOB2Q70IA6 237 aa18■□□□□ 0.47
RTN4-204ENST00000357732 LINC00523Q86TU6 105 aa18■□□□□ 0.47
RTN4-204ENST00000357732 PIGZQ86VD9 579 aa18■□□□□ 0.47
RTN4-204ENST00000357732 KLHDC8BQ8IXV7 354 aa18■□□□□ 0.47
RTN4-204ENST00000357732 APPL2Q8NEU8 664 aa18■□□□□ 0.47
RTN4-204ENST00000357732 IRGQQ8WZA9 623 aa18■□□□□ 0.47
RTN4-204ENST00000357732 TSC2P49815 1807 aa18■□□□□ 0.47
RTN4-204ENST00000357732 M0QYT0 321 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 CXCL11O14625 94 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 NPHS1O60500 1241 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 FAM58BPP0C7Q3 252 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 XRCC1P18887 633 aaPredicted RBP17.99■□□□□ 0.47
RTN4-204ENST00000357732 MRPS22P82650 360 aaKnown RBP17.99■□□□□ 0.47
RTN4-204ENST00000357732 ADIGQ0VDE8 80 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 APOFQ13790 326 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 ARMCX2Q7L311 632 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 GPC2Q8N158 579 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 RCN3Q96D15 328 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 ATXN7L3BQ96GX2 97 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 MAELQ96JY0 434 aaKnown RBP17.99■□□□□ 0.47
RTN4-204ENST00000357732 KIFC1Q9BW19 673 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 RBM38Q9H0Z9 239 aaKnown RBP17.99■□□□□ 0.47
RTN4-204ENST00000357732 WDR55Q9H6Y2 383 aaPredicted RBP17.99■□□□□ 0.47
RTN4-204ENST00000357732 CAB39LQ9H9S4 337 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 PHF24Q9UPV7 400 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 PDCD11Q14690 1871 aaKnown RBP17.99■□□□□ 0.47
RTN4-204ENST00000357732 OTOFQ9HC10 1997 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 KCNK1O00180 336 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 VILLO15195 856 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 HCRTO43612 131 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 CHRNGP07510 517 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 ADRA1BP35368 520 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 KPNA2P52292 529 aaKnown RBP17.99■□□□□ 0.47
RTN4-204ENST00000357732 CDH17Q12864 832 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 NOTUMQ6P988 496 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 ZC3HC1Q86WB0 502 aaKnown RBP17.99■□□□□ 0.47
RTN4-204ENST00000357732 EFCAB3Q8N7B9 438 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 BHLHE22Q8NFJ8 381 aaPredicted RBP17.99■□□□□ 0.47
RTN4-204ENST00000357732 RIN3Q8TB24 985 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 LZICQ8WZA0 190 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 MFSD3Q96ES6 412 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 UBAP1Q9NZ09 502 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 CLIC5Q9NZA1 410 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 ZNF236Q9UL36 1845 aa17.99■□□□□ 0.47
RTN4-204ENST00000357732 TARM1B6A8C7 271 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 C9IYK1 514 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 ACOT8O14734 319 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 PGM3O95394 542 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 PDGFRBP09619 1106 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 ETS2P15036 469 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 ERCC2P18074 760 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms