RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 ZNF467Q7Z7K2 595 aaPredicted RBP10.84□□□□□ -0.67
CAPN3-205ENST00000357568 FIBCD1Q8N539 461 aa10.84□□□□□ -0.67
CAPN3-205ENST00000357568 TTC39CQ8N584 583 aa10.84□□□□□ -0.67
CAPN3-205ENST00000357568 PCDH19Q8TAB3 1148 aa10.84□□□□□ -0.67
CAPN3-205ENST00000357568 ISOC1Q96CN7 298 aa10.84□□□□□ -0.67
CAPN3-205ENST00000357568 RCN3Q96D15 328 aa10.84□□□□□ -0.67
CAPN3-205ENST00000357568 KLHL32Q96NJ5 620 aa10.84□□□□□ -0.67
CAPN3-205ENST00000357568 OR52B2Q96RD2 323 aa10.84□□□□□ -0.67
CAPN3-205ENST00000357568 TDRD1Q9BXT4 1180 aaKnown RBP10.84□□□□□ -0.67
CAPN3-205ENST00000357568 OXCT2Q9BYC2 517 aaPredicted RBP10.84□□□□□ -0.67
CAPN3-205ENST00000357568 NIFKQ9BYG3 293 aaKnown RBP10.84□□□□□ -0.67
CAPN3-205ENST00000357568 YTHDF1Q9BYJ9 559 aaKnown RBP10.84□□□□□ -0.67
CAPN3-205ENST00000357568 JPH1Q9HDC5 661 aaPredicted RBP10.84□□□□□ -0.67
CAPN3-205ENST00000357568 TXNDC16Q9P2K2 825 aa10.84□□□□□ -0.67
CAPN3-205ENST00000357568 ANKRD6Q9Y2G4 727 aa10.84□□□□□ -0.67
CAPN3-205ENST00000357568 FADS3Q9Y5Q0 445 aa10.84□□□□□ -0.67
CAPN3-205ENST00000357568 PLXNA1Q9UIW2 1896 aa10.84□□□□□ -0.67
CAPN3-205ENST00000357568 LCTP09848 1927 aa10.83□□□□□ -0.67
CAPN3-205ENST00000357568 SUPT3HO75486 399 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 TNNC2P02585 160 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 HOXC6P09630 235 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 MCF2P10911 925 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 MYCLP12524 364 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-205ENST00000357568 CD19P15391 556 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 EPHA3P29320 983 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 ENTPD1P49961 510 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 RPL14P50914 215 aaKnown RBP10.83□□□□□ -0.68
CAPN3-205ENST00000357568 LIMK2P53671 638 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 PTPN11Q06124 597 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-205ENST00000357568 NSUN2Q08J23 767 aaKnown RBP eCLIP10.83□□□□□ -0.68
CAPN3-205ENST00000357568 PEX6Q13608 980 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 TRIM25Q14258 630 aaKnown RBP10.83□□□□□ -0.68
CAPN3-205ENST00000357568 FAM102AQ5T9C2 384 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-205ENST00000357568 ARHGEF16Q5VV41 709 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 GRAMD4Q6IC98 578 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 SWSAP1Q6NVH7 229 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 GALNT4Q8N4A0 578 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 EFCAB3Q8N7B9 438 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 CD99L2Q8TCZ2 262 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 MAPK15Q8TD08 544 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 CHPT1Q8WUD6 406 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 SNRNP27Q8WVK2 155 aaKnown RBP10.83□□□□□ -0.68
CAPN3-205ENST00000357568 MTMR12Q9C0I1 747 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 VRTNQ9H8Y1 702 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 SNX15Q9NRS6 342 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 CPSF3Q9UKF6 684 aaKnown RBP10.83□□□□□ -0.68
CAPN3-205ENST00000357568 KIAA1257Q9ULG3 409 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 A0A0A0MRY4 1105 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 MAGEB3O15480 346 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 PAPSS1O43252 624 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-205ENST00000357568 ADCY6O43306 1168 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 MICAL2O94851 1124 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 VAPBO95292 243 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 INHBBP09529 407 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 SUPT20HL2P0C7V6 817 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 VDRP11473 427 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 BMP2P12643 396 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 DCKP27707 260 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 GPD2P43304 727 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 CSE1LP55060 971 aaKnown RBP10.83□□□□□ -0.68
CAPN3-205ENST00000357568 SLC10A2Q12908 348 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-205ENST00000357568 MAP2K5Q13163 448 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 MPP3Q13368 585 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 IRF5Q13568 498 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 C16orf72Q14CZ0 275 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 LSM12Q3MHD2 195 aaKnown RBP10.83□□□□□ -0.68
CAPN3-205ENST00000357568 NIPAL1Q6NVV3 410 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 HACD2Q6Y1H2 254 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 PDPRQ8NCN5 879 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 DNERQ8NFT8 737 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 RXFP2Q8WXD0 754 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 SPATA13Q96N96 652 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 RBBP8Q99708 897 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 TUBA1CQ9BQE3 449 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 MRPL4Q9BYD3 311 aaKnown RBP10.83□□□□□ -0.68
CAPN3-205ENST00000357568 DNAI2Q9GZS0 605 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 UNC93B1Q9H1C4 597 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 RNPEPQ9H4A4 650 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 COQ10BQ9H8M1 238 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 OXSMQ9NWU1 459 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 TJP2Q9UDY2 1190 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 SUN2Q9UH99 717 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 GJD2Q9UKL4 321 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 CDYLQ9Y232 598 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 ZSWIM8A7E2V4 1837 aa10.83□□□□□ -0.68
CAPN3-205ENST00000357568 WDR27A2RRH5 827 aa10.82□□□□□ -0.68
CAPN3-205ENST00000357568 LRRIQ4A6NIV6 560 aa10.82□□□□□ -0.68
CAPN3-205ENST00000357568 C9IYK1 514 aa10.82□□□□□ -0.68
CAPN3-205ENST00000357568 PDGFRAP16234 1089 aa10.82□□□□□ -0.68
CAPN3-205ENST00000357568 MYF6P23409 242 aa10.82□□□□□ -0.68
CAPN3-205ENST00000357568 CTGFP29279 349 aa10.82□□□□□ -0.68
CAPN3-205ENST00000357568 SERPINB5P36952 375 aa10.82□□□□□ -0.68
CAPN3-205ENST00000357568 NDST2P52849 883 aa10.82□□□□□ -0.68
CAPN3-205ENST00000357568 CYTH1Q15438 398 aa10.82□□□□□ -0.68
CAPN3-205ENST00000357568 MOGQ16653 247 aa10.82□□□□□ -0.68
CAPN3-205ENST00000357568 ZNF792Q3KQV3 632 aa10.82□□□□□ -0.68
CAPN3-205ENST00000357568 ZNF394Q53GI3 561 aa10.82□□□□□ -0.68
CAPN3-205ENST00000357568 NHSL2Q5HYW2 709 aa10.82□□□□□ -0.68
CAPN3-205ENST00000357568 INTS11Q5TA45 600 aaKnown RBP10.82□□□□□ -0.68
CAPN3-205ENST00000357568 DCLRE1AQ6PJP8 1040 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms