RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 CCT8L2Q96SF2 557 aa17.54■□□□□ 0.4
VPS13B-201ENST00000355155 CXorf49A8MYA2 514 aaPredicted RBP17.53■□□□□ 0.4
VPS13B-201ENST00000355155 CLDN11O75508 207 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 POLBP06746 335 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 CNPP09543 421 aaKnown RBP17.53■□□□□ 0.4
VPS13B-201ENST00000355155 NEK3P51956 506 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 EPHA5P54756 1037 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 SLC7A9P82251 487 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 RFTN1Q14699 578 aaPredicted RBP17.53■□□□□ 0.4
VPS13B-201ENST00000355155 RANBP10Q6VN20 620 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 BCAS4Q8TDM0 211 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 MAGEB18Q96M61 343 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 TBL1YQ9BQ87 522 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 ZNF334Q9HCZ1 680 aaPredicted RBP17.53■□□□□ 0.4
VPS13B-201ENST00000355155 TBK1Q9UHD2 729 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 ZCWPW2A0A1B0GU75 182 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 RAMP2O60895 175 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 SIN3BO75182 1162 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 KLKB1P03952 638 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 INHBAP08476 426 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 SNRPAP09012 282 aaKnown RBP17.53■□□□□ 0.4
VPS13B-201ENST00000355155 HSPA1AP0DMV8 641 aaKnown RBP17.53■□□□□ 0.4
VPS13B-201ENST00000355155 HSPA1BP0DMV9 641 aaKnown RBP17.53■□□□□ 0.4
VPS13B-201ENST00000355155 OTOP2Q7RTS6 562 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 ZNF473Q8WTR7 871 aaKnown RBP17.53■□□□□ 0.4
VPS13B-201ENST00000355155 BADQ92934 168 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 PRICKLE1Q96MT3 831 aaPredicted RBP17.53■□□□□ 0.4
VPS13B-201ENST00000355155 ACE2Q9BYF1 805 aaPredicted RBP17.53■□□□□ 0.4
VPS13B-201ENST00000355155 RNF38Q9H0F5 515 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 RBM22Q9NW64 420 aaKnown RBP eCLIP17.53■□□□□ 0.4
VPS13B-201ENST00000355155 MYLKQ15746 1914 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 ILVBLA1L0T0 632 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 TGM5O43548 720 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 DHRS4L1P0CG22 281 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 MGAT5Q09328 741 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 MSLNQ13421 630 aaPredicted RBP17.53■□□□□ 0.4
VPS13B-201ENST00000355155 SYCP2LQ5T4T6 812 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 STXBP5Q5T5C0 1151 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 ADGRF1Q5T601 910 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 POTEHQ6S545 545 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 ACMSDQ8TDX5 336 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 ADAMTS19Q8TE59 1207 aa17.53■□□□□ 0.4
VPS13B-201ENST00000355155 RPRD1AQ96P16 312 aaPredicted RBP17.53■□□□□ 0.4
VPS13B-201ENST00000355155 PRRG1O14668 218 aa17.52■□□□□ 0.4
VPS13B-201ENST00000355155 MMP2P08253 660 aa17.52■□□□□ 0.4
VPS13B-201ENST00000355155 BMPR1AP36894 532 aa17.52■□□□□ 0.4
VPS13B-201ENST00000355155 POLD3Q15054 466 aaPredicted RBP17.52■□□□□ 0.4
VPS13B-201ENST00000355155 TRMT10BQ6PF06 316 aaKnown RBP17.52■□□□□ 0.4
VPS13B-201ENST00000355155 CAPN12Q6ZSI9 719 aa17.52■□□□□ 0.4
VPS13B-201ENST00000355155 OTOP3Q7RTS5 596 aa17.52■□□□□ 0.4
VPS13B-201ENST00000355155 MRGPRX2Q96LB1 330 aa17.52■□□□□ 0.4
VPS13B-201ENST00000355155 AGO1Q9UL18 857 aaKnown RBP17.52■□□□□ 0.4
VPS13B-201ENST00000355155 GOLGA6L7A0A1B0GV03 622 aa17.52■□□□□ 0.39
VPS13B-201ENST00000355155 A0A1W2PPM1 405 aa17.52■□□□□ 0.39
VPS13B-201ENST00000355155 KRT37O76014 449 aa17.52■□□□□ 0.39
VPS13B-201ENST00000355155 KRT15P19012 456 aa17.52■□□□□ 0.39
VPS13B-201ENST00000355155 MAGEA12P43365 314 aa17.52■□□□□ 0.39
VPS13B-201ENST00000355155 WDR4P57081 412 aaKnown RBP17.52■□□□□ 0.39
VPS13B-201ENST00000355155 TTC19Q6DKK2 380 aaPredicted RBP17.52■□□□□ 0.39
VPS13B-201ENST00000355155 LGI2Q8N0V4 545 aa17.52■□□□□ 0.39
VPS13B-201ENST00000355155 KLHL23Q8NBE8 558 aa17.52■□□□□ 0.39
VPS13B-201ENST00000355155 NKIRAS1Q9NYS0 192 aa17.52■□□□□ 0.39
VPS13B-201ENST00000355155 ZNF510Q9Y2H8 683 aa17.52■□□□□ 0.39
VPS13B-201ENST00000355155 KDELR3O43731 214 aa17.51■□□□□ 0.39
VPS13B-201ENST00000355155 FGF19O95750 216 aa17.51■□□□□ 0.39
VPS13B-201ENST00000355155 ADH1AP07327 375 aa17.51■□□□□ 0.39
VPS13B-201ENST00000355155 HOXD9P28356 352 aaPredicted RBP17.51■□□□□ 0.39
VPS13B-201ENST00000355155 HOXA9P31269 272 aa17.51■□□□□ 0.39
VPS13B-201ENST00000355155 ANKRD20A4Q4UJ75 823 aa17.51■□□□□ 0.39
VPS13B-201ENST00000355155 FAM182AQ5T1J6 154 aa17.51■□□□□ 0.39
VPS13B-201ENST00000355155 FAM117BQ6P1L5 589 aa17.51■□□□□ 0.39
VPS13B-201ENST00000355155 PIGWQ7Z7B1 504 aa17.51■□□□□ 0.39
VPS13B-201ENST00000355155 CNTN4Q8IWV2 1026 aa17.51■□□□□ 0.39
VPS13B-201ENST00000355155 ARRDC2Q8TBH0 407 aa17.51■□□□□ 0.39
VPS13B-201ENST00000355155 CDKL2Q92772 493 aa17.51■□□□□ 0.39
VPS13B-201ENST00000355155 APOPT1Q96IL0 206 aa17.51■□□□□ 0.39
VPS13B-201ENST00000355155 MAD1L1Q9Y6D9 718 aa17.51■□□□□ 0.39
VPS13B-201ENST00000355155 HMX2A2RU54 273 aa17.51■□□□□ 0.39
VPS13B-201ENST00000355155 KRT38O76015 456 aa17.51■□□□□ 0.39
VPS13B-201ENST00000355155 ALADP13716 330 aa17.51■□□□□ 0.39
VPS13B-201ENST00000355155 CORO1AP31146 461 aaKnown RBP17.51■□□□□ 0.39
VPS13B-201ENST00000355155 CSRP3P50461 194 aa17.51■□□□□ 0.39
VPS13B-201ENST00000355155 PCID2Q5JVF3 399 aa17.51■□□□□ 0.39
VPS13B-201ENST00000355155 MARC1Q5VT66 337 aa17.51■□□□□ 0.39
VPS13B-201ENST00000355155 CPXM2Q8N436 756 aa17.51■□□□□ 0.39
VPS13B-201ENST00000355155 CERS2Q96G23 380 aa17.51■□□□□ 0.39
VPS13B-201ENST00000355155 FCRL3Q96P31 734 aaPredicted RBP17.51■□□□□ 0.39
VPS13B-201ENST00000355155 EMILIN2Q9BXX0 1053 aa17.51■□□□□ 0.39
VPS13B-201ENST00000355155 IKBKGQ9Y6K9 419 aa17.51■□□□□ 0.39
VPS13B-201ENST00000355155 A0A1B0GVM2 712 aa17.5■□□□□ 0.39
VPS13B-201ENST00000355155 TCAF2A6NFQ2 919 aa17.5■□□□□ 0.39
VPS13B-201ENST00000355155 RFPL1O75677 317 aa17.5■□□□□ 0.39
VPS13B-201ENST00000355155 EPOP01588 193 aa17.5■□□□□ 0.39
VPS13B-201ENST00000355155 CPNE1Q99829 537 aa17.5■□□□□ 0.39
VPS13B-201ENST00000355155 RIMKLBQ9ULI2 386 aa17.5■□□□□ 0.39
VPS13B-201ENST00000355155 MIA3Q5JRA6 1907 aa17.5■□□□□ 0.39
VPS13B-201ENST00000355155 MYO18AQ92614 2054 aaKnown RBP17.5■□□□□ 0.39
VPS13B-201ENST00000355155 LOC285095A0A1B0GVY8 99 aa17.5■□□□□ 0.39
VPS13B-201ENST00000355155 C2orf78A6NCI8 922 aa17.5■□□□□ 0.39
VPS13B-201ENST00000355155 J3KR12 359 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms