RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 SCAMP5Q8TAC9 235 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 RDH11Q8TC12 318 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 PGLYRP2Q96PD5 576 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 IL12RB2Q99665 862 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 GPR22Q99680 433 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 ADAM2Q99965 735 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 TBL1YQ9BQ87 522 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 PNPOQ9NVS9 261 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 ZNF358Q9NW07 568 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 UBP1Q9NZI7 540 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 TLK1Q9UKI8 766 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 NEU3Q9UQ49 428 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 TRIM13O60858 407 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 PAGE1O75459 146 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 PRKAA2P54646 552 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 TRIM32Q13049 653 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 UBAP2LQ14157 1087 aaKnown RBP22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 RCN1Q15293 331 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 TSNAXIP1Q2TAA8 658 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 TIGD7Q6NT04 549 aaPredicted RBP22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 PKN3Q6P5Z2 889 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 OTOP3Q7RTS5 596 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 GPATCH11Q8N954 259 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 PTCD2Q8WV60 388 aaKnown RBP22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 AZIN2Q96A70 460 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 FAM161BQ96MY7 647 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 TSNARE1Q96NA8 513 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 RHOJQ9H4E5 214 aa22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 STX18Q9P2W9 335 aaKnown RBP22.65■■□□□ 1.22
NKX2-1-201ENST00000354822 G3V2L1 256 aa22.64■■□□□ 1.21
NKX2-1-201ENST00000354822 VHLP40337 213 aa22.64■■□□□ 1.21
NKX2-1-201ENST00000354822 GEMP55040 296 aa22.64■■□□□ 1.21
NKX2-1-201ENST00000354822 MXRA7P84157 204 aa22.64■■□□□ 1.21
NKX2-1-201ENST00000354822 SLC34A1Q06495 639 aa22.64■■□□□ 1.21
NKX2-1-201ENST00000354822 CACNB2Q08289 660 aaPredicted RBP22.64■■□□□ 1.21
NKX2-1-201ENST00000354822 TRMT5Q32P41 509 aaKnown RBP22.64■■□□□ 1.21
NKX2-1-201ENST00000354822 MANEALQ5VSG8 457 aa22.64■■□□□ 1.21
NKX2-1-201ENST00000354822 ARHGAP12Q8IWW6 846 aa22.64■■□□□ 1.21
NKX2-1-201ENST00000354822 TNS4Q8IZW8 715 aa22.64■■□□□ 1.21
NKX2-1-201ENST00000354822 WDR60Q8WVS4 1066 aa22.64■■□□□ 1.21
NKX2-1-201ENST00000354822 GLOD4Q9HC38 313 aa22.64■■□□□ 1.21
NKX2-1-201ENST00000354822 ZNF195O14628 629 aa22.63■■□□□ 1.21
NKX2-1-201ENST00000354822 SIN3BO75182 1162 aa22.63■■□□□ 1.21
NKX2-1-201ENST00000354822 GRIK1P39086 918 aa22.63■■□□□ 1.21
NKX2-1-201ENST00000354822 SLC5A3P53794 718 aa22.63■■□□□ 1.21
NKX2-1-201ENST00000354822 PRKCZQ05513 592 aa22.63■■□□□ 1.21
NKX2-1-201ENST00000354822 LPIN1Q14693 890 aa22.63■■□□□ 1.21
NKX2-1-201ENST00000354822 POTEHQ6S545 545 aa22.63■■□□□ 1.21
NKX2-1-201ENST00000354822 MAGED2Q9UNF1 606 aaPredicted RBP22.63■■□□□ 1.21
NKX2-1-201ENST00000354822 INPP5FQ9Y2H2 1132 aa22.63■■□□□ 1.21
NKX2-1-201ENST00000354822 SHROOM3Q8TF72 1996 aa22.63■■□□□ 1.21
NKX2-1-201ENST00000354822 MAFKO60675 156 aa22.63■■□□□ 1.21
NKX2-1-201ENST00000354822 HSPA4LO95757 839 aa22.63■■□□□ 1.21
NKX2-1-201ENST00000354822 ALDH1A1P00352 501 aa22.63■■□□□ 1.21
NKX2-1-201ENST00000354822 CSRP3P50461 194 aa22.63■■□□□ 1.21
NKX2-1-201ENST00000354822 ZRSR2Q15696 482 aaKnown RBP22.63■■□□□ 1.21
NKX2-1-201ENST00000354822 USP33Q8TEY7 942 aa22.63■■□□□ 1.21
NKX2-1-201ENST00000354822 FCRL2Q96LA5 508 aaPredicted RBP22.63■■□□□ 1.21
NKX2-1-201ENST00000354822 TMEM209Q96SK2 561 aa22.63■■□□□ 1.21
NKX2-1-201ENST00000354822 CAB39LQ9H9S4 337 aa22.63■■□□□ 1.21
NKX2-1-201ENST00000354822 ENTPD7Q9NQZ7 604 aa22.63■■□□□ 1.21
NKX2-1-201ENST00000354822 FNIP2Q9P278 1114 aa22.63■■□□□ 1.21
NKX2-1-201ENST00000354822 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.63■■□□□ 1.21
NKX2-1-201ENST00000354822 TNFRSF10BO14763 440 aa22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 ASGR1P07306 291 aa22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 COL6A2P12110 1019 aa22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 NRG1Q02297 640 aaPredicted RBP22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 THOC5Q13769 683 aaKnown RBP22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 NAA25Q14CX7 972 aa22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 METTL21CQ5VZV1 264 aa22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 ARMC3Q5W041 872 aa22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 MAVSQ7Z434 540 aa22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 ZC3HC1Q86WB0 502 aaKnown RBP22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 CNTN4Q8IWV2 1026 aa22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 ULK2Q8IYT8 1036 aa22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 HASPINQ8TF76 798 aa22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 CMTM5Q96DZ9 223 aa22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 THTPAQ9BU02 230 aa22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 CDH19Q9H159 772 aa22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 MRM3Q9HC36 420 aaKnown RBP22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 ZNF212Q9UDV6 495 aa22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 SLC39A10Q9ULF5 831 aa22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 PCDHB8Q9UN66 801 aa22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 SQORQ9Y6N5 450 aa22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 INPPL1O15357 1258 aa22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 ATP6V1C1P21283 382 aa22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 HK2P52789 917 aa22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 YWHAHQ04917 246 aaPredicted RBP22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 CFAP157Q5JU67 520 aa22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 RAPH1Q70E73 1250 aa22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 KLHDC9Q8NEP7 349 aa22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 PPHLN1Q8NEY8 458 aaKnown RBP22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 FBXO27Q8NI29 283 aa22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 HHIPL1Q96JK4 782 aa22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 SLC39A8Q9C0K1 460 aa22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 OXSMQ9NWU1 459 aa22.62■■□□□ 1.21
NKX2-1-201ENST00000354822 TDRD15B5MCY1 1934 aaKnown RBP22.61■■□□□ 1.21
NKX2-1-201ENST00000354822 LIN7AO14910 233 aaPredicted RBP22.61■■□□□ 1.21
NKX2-1-201ENST00000354822 KRT36O76013 467 aa22.61■■□□□ 1.21
NKX2-1-201ENST00000354822 ARRB2P32121 409 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms