RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 TUFT1Q9NNX1 390 aa13.46□□□□□ -0.25
IFT88-202ENST00000351808 UGT2A1Q9Y4X1 527 aa13.46□□□□□ -0.25
IFT88-202ENST00000351808 FAM159BA6NKW6 160 aa13.46□□□□□ -0.26
IFT88-202ENST00000351808 DYRK3O43781 588 aa13.46□□□□□ -0.26
IFT88-202ENST00000351808 MBL2P11226 248 aaPredicted RBP13.46□□□□□ -0.26
IFT88-202ENST00000351808 HLCSP50747 726 aa13.46□□□□□ -0.26
IFT88-202ENST00000351808 TRIM32Q13049 653 aa13.46□□□□□ -0.26
IFT88-202ENST00000351808 RSBN1Q5VWQ0 802 aaPredicted RBP13.46□□□□□ -0.26
IFT88-202ENST00000351808 GTF2IRD2BQ6EKJ0 949 aa13.46□□□□□ -0.26
IFT88-202ENST00000351808 OTOP1Q7RTM1 612 aa13.46□□□□□ -0.26
IFT88-202ENST00000351808 SLCO6A1Q86UG4 719 aa13.46□□□□□ -0.26
IFT88-202ENST00000351808 GTF2IRD2Q86UP8 949 aa13.46□□□□□ -0.26
IFT88-202ENST00000351808 RFX6Q8HWS3 928 aa13.46□□□□□ -0.26
IFT88-202ENST00000351808 COLGALT2Q8IYK4 626 aa13.46□□□□□ -0.26
IFT88-202ENST00000351808 ELMOD2Q8IZ81 293 aa13.46□□□□□ -0.26
IFT88-202ENST00000351808 MPP5Q8N3R9 675 aa13.46□□□□□ -0.26
IFT88-202ENST00000351808 NAT16Q8N8M0 369 aa13.46□□□□□ -0.26
IFT88-202ENST00000351808 SNX31Q8N9S9 440 aa13.46□□□□□ -0.26
IFT88-202ENST00000351808 CMASQ8NFW8 434 aaPredicted RBP13.46□□□□□ -0.26
IFT88-202ENST00000351808 ADAMTS10Q9H324 1103 aa13.46□□□□□ -0.26
IFT88-202ENST00000351808 MAGEE1Q9HCI5 957 aa13.46□□□□□ -0.26
IFT88-202ENST00000351808 RBAKQ9NYW8 714 aaPredicted RBP13.46□□□□□ -0.26
IFT88-202ENST00000351808 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.46□□□□□ -0.26
IFT88-202ENST00000351808 SUCOQ9UBS9 1254 aaKnown RBP13.46□□□□□ -0.26
IFT88-202ENST00000351808 KIAA1257Q9ULG3 409 aa13.46□□□□□ -0.26
IFT88-202ENST00000351808 ARIH1Q9Y4X5 557 aaPredicted RBP13.46□□□□□ -0.26
IFT88-202ENST00000351808 PCDHGA7Q9Y5G6 932 aa13.46□□□□□ -0.26
IFT88-202ENST00000351808 SCN7AQ01118 1682 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 ARHGEF35A5YM69 484 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 PRORSD1PA6NEY8 169 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 RFPL2O75678 378 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 NTSR2O95665 410 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 BMP4P12644 408 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 TFE3P19532 575 aaPredicted RBP13.45□□□□□ -0.26
IFT88-202ENST00000351808 ZNF135P52742 658 aaPredicted RBP13.45□□□□□ -0.26
IFT88-202ENST00000351808 STX1BP61266 288 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 GCNT1Q02742 428 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 RFTN1Q14699 578 aaPredicted RBP13.45□□□□□ -0.26
IFT88-202ENST00000351808 ARHGEF6Q15052 776 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 TAF5Q15542 800 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 DLG2Q15700 870 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 CDONQ4KMG0 1287 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 CRTC3Q6UUV7 619 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 DPP8Q6V1X1 898 aaPredicted RBP13.45□□□□□ -0.26
IFT88-202ENST00000351808 HAUS6Q7Z4H7 955 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 OSTM1Q86WC4 334 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 C12orf56Q8IXR9 622 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 ASCC1Q8N9N2 400 aaKnown RBP13.45□□□□□ -0.26
IFT88-202ENST00000351808 VPS33AQ96AX1 596 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 YME1L1Q96TA2 773 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 PLEKHA5Q9HAU0 1116 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 C1orf112Q9NSG2 853 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 DCDC2Q9UHG0 476 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 ENPP5Q9UJA9 477 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 PLIN4Q96Q06 1357 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 CHADO15335 359 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 MFN2O95140 757 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 APRTP07741 180 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 NCAM1P13591 858 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 MPSTP25325 297 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 PLA2G16P53816 162 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 C1QBPQ07021 282 aaKnown RBP13.45□□□□□ -0.26
IFT88-202ENST00000351808 AP3B2Q13367 1082 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 FXNQ16595 210 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 BEND7Q8N7W2 519 aaPredicted RBP13.45□□□□□ -0.26
IFT88-202ENST00000351808 PBXIP1Q96AQ6 731 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 RMDN3Q96TC7 470 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 IRF2BPLQ9H1B7 796 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 GLT8D2Q9H1C3 349 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 WDR6Q9NNW5 1121 aaKnown RBP13.45□□□□□ -0.26
IFT88-202ENST00000351808 SNTG2Q9NY99 539 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 PKD2L2Q9NZM6 624 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 GMPR2Q9P2T1 348 aaKnown RBP13.45□□□□□ -0.26
IFT88-202ENST00000351808 SLC9A2Q9UBY0 812 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 AURKCQ9UQB9 309 aa13.45□□□□□ -0.26
IFT88-202ENST00000351808 KCNU1A8MYU2 1149 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 GAS7O60861 476 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 TADA2AO75478 443 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 CHRNGP07510 517 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 IL1R2P27930 398 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 CCND2P30279 289 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 GNA15P30679 374 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 HOXA13P31271 388 aaPredicted RBP13.44□□□□□ -0.26
IFT88-202ENST00000351808 TJAP1Q5JTD0 557 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 SNAP47Q5SQN1 464 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 ERMP1Q7Z2K6 904 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 MFSD4AQ8N468 514 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 SLC4A11Q8NBS3 891 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 S100ZQ8WXG8 99 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 SEPT8Q92599 483 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 HDAC11Q96DB2 347 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 NGLY1Q96IV0 654 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 SH2D3AQ9BRG2 576 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 B3GNT4Q9C0J1 378 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 ZBTB26Q9HCK0 441 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 CCDC177Q9NQR7 707 aaPredicted RBP13.44□□□□□ -0.26
IFT88-202ENST00000351808 TESMINQ9Y4I5 508 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 H7C0C1 242 aa13.44□□□□□ -0.26
IFT88-202ENST00000351808 DEAF1O75398 565 aaPredicted RBP13.44□□□□□ -0.26
IFT88-202ENST00000351808 YBX3P16989 372 aaKnown RBP eCLIP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms