RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 RUVBL2Q9Y230 463 aaKnown RBP18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 RBM47A0AV96 593 aaKnown RBP18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 MATN2O00339 956 aa18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 GRID2O43424 1007 aa18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 CTBP1Q13363 440 aa18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 R3HDM1Q15032 1099 aaKnown RBP18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 NXNQ6DKJ4 435 aa18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 ZNF280DQ6N043 979 aa18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 DPP9Q86TI2 863 aa18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 APLFQ8IW19 511 aaPredicted RBP18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 DENND6AQ8IWF6 608 aa18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 CNTD1Q8N815 330 aa18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 SCYL1Q96KG9 808 aa18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 SMOQ99835 787 aa18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 SH3GL3Q99963 347 aa18.42■□□□□ 0.54
PTP4A3-202ENST00000349124 MT-CYBP00156 380 aaPredicted RBP18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 AHSGP02765 367 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 XRCC1P18887 633 aaPredicted RBP18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 THOP1P52888 689 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 MS4A2Q01362 244 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 PPIDQ08752 370 aaKnown RBP18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 SEMA3BQ13214 749 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 USP10Q14694 798 aaKnown RBP18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 FSCBQ5H9T9 825 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 ACAD11Q709F0 780 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 LIMS2Q7Z4I7 341 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 SLC41A1Q8IVJ1 513 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 DSELQ8IZU8 1212 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 ZMIZ2Q8NF64 920 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 SGF29Q96ES7 293 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 RTKNQ9BST9 563 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 TRIM4Q9C037 500 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 ADAM28Q9UKQ2 775 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 AK5Q9Y6K8 562 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 NRCAMQ92823 1304 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 TREHO43280 583 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 OR6B1O95007 311 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 YBX3P16989 372 aaKnown RBP eCLIP18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 DPP6P42658 865 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 CCNA1P78396 465 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 MRPS22P82650 360 aaKnown RBP18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 SNX17Q15036 470 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 DUSP28Q4G0W2 176 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 LIN52Q52LA3 116 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 MFSD6LQ8IWD5 586 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 RCN3Q96D15 328 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 ZNF419Q96HQ0 510 aaPredicted RBP18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 ZNF560Q96MR9 790 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 C1QTNF1Q9BXJ1 281 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 SUDS3Q9H7L9 328 aaPredicted RBP18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 ZDHHC7Q9NXF8 308 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 FBXW11Q9UKB1 542 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 IPPQ9Y573 584 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 PLXNA1Q9UIW2 1896 aa18.41■□□□□ 0.54
PTP4A3-202ENST00000349124 OTOFQ9HC10 1997 aa18.4■□□□□ 0.54
PTP4A3-202ENST00000349124 MPOP05164 745 aa18.4■□□□□ 0.54
PTP4A3-202ENST00000349124 TCN1P20061 433 aaPredicted RBP18.4■□□□□ 0.54
PTP4A3-202ENST00000349124 FOLH1Q04609 750 aa18.4■□□□□ 0.54
PTP4A3-202ENST00000349124 GK3PQ14409 553 aa18.4■□□□□ 0.54
PTP4A3-202ENST00000349124 PDCD2Q16342 344 aaPredicted RBP18.4■□□□□ 0.54
PTP4A3-202ENST00000349124 SMG8Q8ND04 991 aaKnown RBP18.4■□□□□ 0.54
PTP4A3-202ENST00000349124 FAM156AQ8NDB6 213 aa18.4■□□□□ 0.54
PTP4A3-202ENST00000349124 MCMBPQ9BTE3 642 aa18.4■□□□□ 0.54
PTP4A3-202ENST00000349124 OR12D3Q9UGF7 316 aa18.4■□□□□ 0.54
PTP4A3-202ENST00000349124 PTGESO14684 152 aa18.4■□□□□ 0.54
PTP4A3-202ENST00000349124 FBXO21O94952 628 aa18.4■□□□□ 0.54
PTP4A3-202ENST00000349124 SRGAP2BP0DMP2 458 aa18.4■□□□□ 0.54
PTP4A3-202ENST00000349124 MPP1Q00013 466 aa18.4■□□□□ 0.54
PTP4A3-202ENST00000349124 POU6F1Q14863 301 aa18.4■□□□□ 0.54
PTP4A3-202ENST00000349124 ZC3HC1Q86WB0 502 aaKnown RBP18.4■□□□□ 0.54
PTP4A3-202ENST00000349124 LSMEM2Q8N112 164 aa18.4■□□□□ 0.54
PTP4A3-202ENST00000349124 FSTL5Q8N475 847 aaPredicted RBP18.4■□□□□ 0.54
PTP4A3-202ENST00000349124 ZSCAN18Q8TBC5 510 aaPredicted RBP18.4■□□□□ 0.54
PTP4A3-202ENST00000349124 SPATA16Q9BXB7 569 aa18.4■□□□□ 0.54
PTP4A3-202ENST00000349124 GBA3Q9H227 469 aa18.4■□□□□ 0.54
PTP4A3-202ENST00000349124 FAM96AQ9H5X1 160 aa18.4■□□□□ 0.54
PTP4A3-202ENST00000349124 LRIG2O94898 1065 aa18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 PGM3O95394 542 aa18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 ENO3P13929 434 aaPredicted RBP18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 ALDH1A3P47895 512 aa18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 RPL14P50914 215 aaKnown RBP18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 DAOAP59103 153 aa18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 PDK3Q15120 406 aa18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 TLR1Q15399 786 aa18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 C11orf91Q3C1V1 193 aa18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 SV2CQ496J9 727 aa18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 RPS27LQ71UM5 84 aaKnown RBP18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 CEP97Q8IW35 865 aa18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 SHCBP1Q8NEM2 672 aa18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 COLEC11Q9BWP8 271 aa18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 TKTL2Q9H0I9 626 aa18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 ATXN3LQ9H3M9 355 aa18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 TLK1Q9UKI8 766 aa18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 HDAC3O15379 428 aa18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 FAM200BP0CF97 657 aa18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 SLC35E2BP0CK96 405 aa18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 CEACAM7Q14002 265 aa18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 SEL1L3Q68CR1 1132 aa18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 TMC7Q7Z402 723 aa18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 SATL1Q86VE3 508 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms