RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 DTX3Q8N9I9 347 aa16.49■□□□□ 0.23
MBD1-204ENST00000347968 FAM20AQ96MK3 541 aa16.49■□□□□ 0.23
MBD1-204ENST00000347968 BEGAINQ9BUH8 593 aa16.49■□□□□ 0.23
MBD1-204ENST00000347968 SLC7A5P2Q9GIP4 190 aa16.49■□□□□ 0.23
MBD1-204ENST00000347968 TMEM8AQ9HCN3 771 aa16.49■□□□□ 0.23
MBD1-204ENST00000347968 ZNF701M0R085 212 aaPredicted RBP16.49■□□□□ 0.23
MBD1-204ENST00000347968 LTFP02788 710 aa16.49■□□□□ 0.23
MBD1-204ENST00000347968 HNRNPFP52597 415 aaKnown RBP16.49■□□□□ 0.23
MBD1-204ENST00000347968 PPP4CP60510 307 aa16.49■□□□□ 0.23
MBD1-204ENST00000347968 MAMDC4Q6UXC1 1216 aa16.49■□□□□ 0.23
MBD1-204ENST00000347968 CCDC81Q6ZN84 652 aa16.49■□□□□ 0.23
MBD1-204ENST00000347968 NATD1Q8N6N6 113 aa16.49■□□□□ 0.23
MBD1-204ENST00000347968 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.49■□□□□ 0.23
MBD1-204ENST00000347968 ZNF420Q8TAQ5 688 aaPredicted RBP16.49■□□□□ 0.23
MBD1-204ENST00000347968 DDX4Q9NQI0 724 aaKnown RBP16.49■□□□□ 0.23
MBD1-204ENST00000347968 COPG2Q9UBF2 871 aa16.49■□□□□ 0.23
MBD1-204ENST00000347968 SLC15A5A6NIM6 579 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 KCNN4O15554 427 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 MFN2O95140 757 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 TGM1P22735 817 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 GTF2A2P52657 109 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 KCNJ11Q14654 390 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 ZIK1Q3SY52 487 aaPredicted RBP16.48■□□□□ 0.23
MBD1-204ENST00000347968 SPNS2Q8IVW8 549 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 CCDC60Q8IWA6 550 aaPredicted RBP16.48■□□□□ 0.23
MBD1-204ENST00000347968 ATP6V0D2Q8N8Y2 350 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 FIG4Q92562 907 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 PSD2Q9BQI7 771 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 LHPPQ9H008 270 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 NEK6Q9HC98 313 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 TRIM39Q9HCM9 518 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 SEL1LQ9UBV2 794 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 ILVBLA1L0T0 632 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 PRORSD1PA6NEY8 169 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 C3orf70A6NLC5 250 aaPredicted RBP16.48■□□□□ 0.23
MBD1-204ENST00000347968 SNHG28P0DPA3 235 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 WNT7BP56706 349 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 MERTKQ12866 999 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 LRIT3Q3SXY7 679 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 RAB6CQ53S08 254 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 EPHX4Q8IUS5 362 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 KIAA0319LQ8IZA0 1049 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 GOLM1Q8NBJ4 401 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 EGLN2Q96KS0 407 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 ZNF347Q96SE7 839 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 TRIM8Q9BZR9 551 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 COA1Q9GZY4 146 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 RAB6CQ9H0N0 254 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 V9GYQ6 96 aa16.48■□□□□ 0.23
MBD1-204ENST00000347968 A8MV72 311 aaPredicted RBP16.47■□□□□ 0.23
MBD1-204ENST00000347968 TMEM233B4DJY2 109 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 HOXC11O43248 304 aaPredicted RBP16.47■□□□□ 0.23
MBD1-204ENST00000347968 SYNCRIPO60506 623 aaKnown RBP16.47■□□□□ 0.23
MBD1-204ENST00000347968 TMCC2O75069 709 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 CRYZL1O95825 349 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 ITGBL1O95965 494 aaPredicted RBP16.47■□□□□ 0.23
MBD1-204ENST00000347968 UBL4AP11441 157 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 KCNA2P16389 499 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 PRKCAP17252 672 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 PSMA2P25787 234 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 PSME3P61289 254 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 OCA2Q04671 838 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 UGT3A1Q6NUS8 523 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 GALNT13Q8IUC8 556 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 ABRAQ8N0Z2 381 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 KCTD6Q8NC69 237 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 ZNF641Q96N77 438 aaPredicted RBP16.47■□□□□ 0.23
MBD1-204ENST00000347968 FAM213AQ9BRX8 229 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 ABCB10Q9NRK6 738 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 TCAF1Q9Y4C2 921 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 PCDHGA7Q9Y5G6 932 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 COL11A2P13942 1736 aaPredicted RBP16.47■□□□□ 0.23
MBD1-204ENST00000347968 GAKO14976 1311 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 CAPNS1P04632 268 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 CDH1P12830 882 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 GARTP22102 1010 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 GLDCP23378 1020 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 TRPC3Q13507 836 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 PPP1R3AQ16821 1122 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 SMU1Q2TAY7 513 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 Q3C1V9 767 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 SNAP47Q5SQN1 464 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 ARFGAP1Q8N6T3 406 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 FLAD1Q8NFF5 587 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 JOSD2Q8TAC2 188 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 CRYGNQ8WXF5 182 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 CDK5RAP1Q96SZ6 601 aaKnown RBP16.47■□□□□ 0.23
MBD1-204ENST00000347968 TDRD1Q9BXT4 1180 aaKnown RBP16.47■□□□□ 0.23
MBD1-204ENST00000347968 DHX35Q9H5Z1 703 aaKnown RBP16.47■□□□□ 0.23
MBD1-204ENST00000347968 IL1RL2Q9HB29 575 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 CNOT11Q9UKZ1 510 aaKnown RBP16.47■□□□□ 0.23
MBD1-204ENST00000347968 MAGED2Q9UNF1 606 aaPredicted RBP16.47■□□□□ 0.23
MBD1-204ENST00000347968 MT-CO1P00395 513 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 CFBP00751 764 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 SERPINB1P30740 379 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 IFNA8P32881 189 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 ROR1Q01973 937 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 POLD3Q15054 466 aaPredicted RBP16.47■□□□□ 0.23
MBD1-204ENST00000347968 PCSK7Q16549 785 aa16.47■□□□□ 0.23
MBD1-204ENST00000347968 TMEM236Q5W0B7 351 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms