RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 GLDCP23378 1020 aa15.76■□□□□ 0.11
VAPA-201ENST00000340541 MAPK8P45983 427 aa15.76■□□□□ 0.11
VAPA-201ENST00000340541 ADKP55263 362 aaKnown RBP15.76■□□□□ 0.11
VAPA-201ENST00000340541 GNA12Q03113 381 aa15.76■□□□□ 0.11
VAPA-201ENST00000340541 ZBTB16Q05516 673 aa15.76■□□□□ 0.11
VAPA-201ENST00000340541 CA9Q16790 459 aa15.76■□□□□ 0.11
VAPA-201ENST00000340541 CCDC122Q5T0U0 273 aa15.76■□□□□ 0.11
VAPA-201ENST00000340541 ZNF776Q68DI1 518 aaPredicted RBP15.76■□□□□ 0.11
VAPA-201ENST00000340541 RWDD4Q6NW29 188 aaKnown RBP15.76■□□□□ 0.11
VAPA-201ENST00000340541 SLC41A1Q8IVJ1 513 aa15.76■□□□□ 0.11
VAPA-201ENST00000340541 SH2D3CQ8N5H7 860 aa15.76■□□□□ 0.11
VAPA-201ENST00000340541 DEFB124Q8NES8 71 aa15.76■□□□□ 0.11
VAPA-201ENST00000340541 TOE1Q96GM8 510 aaKnown RBP15.76■□□□□ 0.11
VAPA-201ENST00000340541 CHP1Q99653 195 aa15.76■□□□□ 0.11
VAPA-201ENST00000340541 C2orf49Q9BVC5 232 aaPredicted RBP15.76■□□□□ 0.11
VAPA-201ENST00000340541 ACE2Q9BYF1 805 aaPredicted RBP15.76■□□□□ 0.11
VAPA-201ENST00000340541 DNAAF2Q9NVR5 837 aaKnown RBP15.76■□□□□ 0.11
VAPA-201ENST00000340541 GPATCH2LQ9NWQ4 482 aa15.76■□□□□ 0.11
VAPA-201ENST00000340541 SLC25A13Q9UJS0 675 aa15.76■□□□□ 0.11
VAPA-201ENST00000340541 CHD6Q8TD26 2715 aa15.75■□□□□ 0.11
VAPA-201ENST00000340541 SSU72P8A0A1W2PR75 194 aa15.75■□□□□ 0.11
VAPA-201ENST00000340541 K7ERQ8 282 aa15.75■□□□□ 0.11
VAPA-201ENST00000340541 TRIM16O95361 564 aa15.75■□□□□ 0.11
VAPA-201ENST00000340541 ACADMP11310 421 aa15.75■□□□□ 0.11
VAPA-201ENST00000340541 GNSP15586 552 aa15.75■□□□□ 0.11
VAPA-201ENST00000340541 MIPP30301 263 aa15.75■□□□□ 0.11
VAPA-201ENST00000340541 ACVRL1P37023 503 aa15.75■□□□□ 0.11
VAPA-201ENST00000340541 NNMTP40261 264 aa15.75■□□□□ 0.11
VAPA-201ENST00000340541 MAPKAPK2P49137 400 aa15.75■□□□□ 0.11
VAPA-201ENST00000340541 GALCP54803 685 aa15.75■□□□□ 0.11
VAPA-201ENST00000340541 KRT83P78385 493 aa15.75■□□□□ 0.11
VAPA-201ENST00000340541 DLG2Q15700 870 aa15.75■□□□□ 0.11
VAPA-201ENST00000340541 SLC18A3Q16572 532 aa15.75■□□□□ 0.11
VAPA-201ENST00000340541 WDR45BQ5MNZ6 344 aa15.75■□□□□ 0.11
VAPA-201ENST00000340541 LINGO4Q6UY18 593 aa15.75■□□□□ 0.11
VAPA-201ENST00000340541 STK40Q8N2I9 435 aa15.75■□□□□ 0.11
VAPA-201ENST00000340541 SNRNP25Q9BV90 132 aaKnown RBP15.75■□□□□ 0.11
VAPA-201ENST00000340541 SCNM1Q9BWG6 230 aa15.75■□□□□ 0.11
VAPA-201ENST00000340541 TRIM5Q9C035 493 aa15.75■□□□□ 0.11
VAPA-201ENST00000340541 ZDHHC5Q9C0B5 715 aa15.75■□□□□ 0.11
VAPA-201ENST00000340541 PABPC3Q9H361 631 aaKnown RBP15.75■□□□□ 0.11
VAPA-201ENST00000340541 NOL6Q9H6R4 1146 aaKnown RBP15.75■□□□□ 0.11
VAPA-201ENST00000340541 PCSK1NQ9UHG2 260 aa15.75■□□□□ 0.11
VAPA-201ENST00000340541 DNAI1Q9UI46 699 aa15.75■□□□□ 0.11
VAPA-201ENST00000340541 AP4E1Q9UPM8 1137 aa15.75■□□□□ 0.11
VAPA-201ENST00000340541 NEUROG3Q9Y4Z2 214 aa15.75■□□□□ 0.11
VAPA-201ENST00000340541 C1QTNF9BB2RNN3 333 aa15.74■□□□□ 0.11
VAPA-201ENST00000340541 SMAD6O43541 496 aaKnown RBP15.74■□□□□ 0.11
VAPA-201ENST00000340541 RNF8O76064 485 aa15.74■□□□□ 0.11
VAPA-201ENST00000340541 CD160O95971 181 aa15.74■□□□□ 0.11
VAPA-201ENST00000340541 DNTTP04053 509 aa15.74■□□□□ 0.11
VAPA-201ENST00000340541 C1QTNF9P0C862 333 aa15.74■□□□□ 0.11
VAPA-201ENST00000340541 TCF4P15884 667 aa15.74■□□□□ 0.11
VAPA-201ENST00000340541 DESP17661 470 aa15.74■□□□□ 0.11
VAPA-201ENST00000340541 EPHB2P29323 1055 aa15.74■□□□□ 0.11
VAPA-201ENST00000340541 OXTRP30559 389 aa15.74■□□□□ 0.11
VAPA-201ENST00000340541 ACSL1P33121 698 aa15.74■□□□□ 0.11
VAPA-201ENST00000340541 ARF5P84085 180 aa15.74■□□□□ 0.11
VAPA-201ENST00000340541 ELAVL3Q14576 367 aaKnown RBP15.74■□□□□ 0.11
VAPA-201ENST00000340541 CST6Q15828 149 aa15.74■□□□□ 0.11
VAPA-201ENST00000340541 Q6ZVU0 165 aa15.74■□□□□ 0.11
VAPA-201ENST00000340541 MMAAQ8IVH4 418 aaKnown RBP15.74■□□□□ 0.11
VAPA-201ENST00000340541 RTL3Q8N8U3 475 aaKnown RBP15.74■□□□□ 0.11
VAPA-201ENST00000340541 CADM4Q8NFZ8 388 aa15.74■□□□□ 0.11
VAPA-201ENST00000340541 ARHGEF2Q92974 986 aaKnown RBP15.74■□□□□ 0.11
VAPA-201ENST00000340541 HSPA12BQ96MM6 686 aa15.74■□□□□ 0.11
VAPA-201ENST00000340541 EPAS1Q99814 870 aa15.74■□□□□ 0.11
VAPA-201ENST00000340541 SPON2Q9BUD6 331 aa15.74■□□□□ 0.11
VAPA-201ENST00000340541 NUP85Q9BW27 656 aa15.74■□□□□ 0.11
VAPA-201ENST00000340541 GPR174Q9BXC1 333 aa15.74■□□□□ 0.11
VAPA-201ENST00000340541 TMEM121BQ9BXQ6 578 aaPredicted RBP15.74■□□□□ 0.11
VAPA-201ENST00000340541 PACSIN1Q9BY11 444 aa15.74■□□□□ 0.11
VAPA-201ENST00000340541 ATP13A1Q9HD20 1204 aa15.74■□□□□ 0.11
VAPA-201ENST00000340541 SERGEFQ9UGK8 458 aa15.74■□□□□ 0.11
VAPA-201ENST00000340541 ATXN2Q99700 1313 aaKnown RBP15.73■□□□□ 0.11
VAPA-201ENST00000340541 FAM221BA6H8Z2 402 aa15.73■□□□□ 0.11
VAPA-201ENST00000340541 WASH4PA8MWX3 477 aa15.73■□□□□ 0.11
VAPA-201ENST00000340541 CBX4O00257 560 aa15.73■□□□□ 0.11
VAPA-201ENST00000340541 MID1O15344 667 aa15.73■□□□□ 0.11
VAPA-201ENST00000340541 CREB3O43889 395 aa15.73■□□□□ 0.11
VAPA-201ENST00000340541 ZNF821O75541 412 aaPredicted RBP15.73■□□□□ 0.11
VAPA-201ENST00000340541 IL1R2P27930 398 aa15.73■□□□□ 0.11
VAPA-201ENST00000340541 PCK1P35558 622 aa15.73■□□□□ 0.11
VAPA-201ENST00000340541 CLCN6P51797 869 aa15.73■□□□□ 0.11
VAPA-201ENST00000340541 ACAP1Q15027 740 aa15.73■□□□□ 0.11
VAPA-201ENST00000340541 ERMARDQ5T6L9 678 aa15.73■□□□□ 0.11
VAPA-201ENST00000340541 USP30Q70CQ3 517 aa15.73■□□□□ 0.11
VAPA-201ENST00000340541 FAM124AQ86V42 546 aa15.73■□□□□ 0.11
VAPA-201ENST00000340541 CNGA4Q8IV77 575 aa15.73■□□□□ 0.11
VAPA-201ENST00000340541 MINDY1Q8N5J2 469 aa15.73■□□□□ 0.11
VAPA-201ENST00000340541 NIPA2Q8N8Q9 360 aa15.73■□□□□ 0.11
VAPA-201ENST00000340541 DNASE2BQ8WZ79 361 aa15.73■□□□□ 0.11
VAPA-201ENST00000340541 GATA6Q92908 595 aa15.73■□□□□ 0.11
VAPA-201ENST00000340541 BTBD6Q96KE9 485 aa15.73■□□□□ 0.11
VAPA-201ENST00000340541 KCTD15Q96SI1 283 aaPredicted RBP15.73■□□□□ 0.11
VAPA-201ENST00000340541 GTPBP2Q9BX10 602 aaKnown RBP15.73■□□□□ 0.11
VAPA-201ENST00000340541 MAGEH1Q9H213 219 aa15.73■□□□□ 0.11
VAPA-201ENST00000340541 SCML1Q9UN30 329 aa15.73■□□□□ 0.11
VAPA-201ENST00000340541 MSRB2Q9Y3D2 182 aa15.73■□□□□ 0.11
VAPA-201ENST00000340541 ACTL7AQ9Y615 435 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms