RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 VPS36Q86VN1 386 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 ZCCHC9Q8N567 271 aaKnown RBP13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 MINDY1Q8N5J2 469 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 ATP11CQ8NB49 1132 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 C1orf216Q8TAB5 229 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 SNX19Q92543 992 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 FAM131CQ96AQ9 280 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 BIRC7Q96CA5 298 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 TBC1D31Q96DN5 1066 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 PSMB7Q99436 277 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 EIF3CQ99613 913 aaKnown RBP13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 NCAPGQ9BPX3 1015 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 SLC32A1Q9H598 525 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 HAUS4Q9H6D7 363 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 ATP13A1Q9HD20 1204 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 TMEM248Q9NWD8 314 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 DONSONQ9NYP3 566 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 EIF2B4Q9UI10 523 aaKnown RBP13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 PPM1HQ9ULR3 514 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 SNX10Q9Y5X0 201 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 SCINQ9Y6U3 715 aa13.65□□□□□ -0.22
SIRPB3P-201ENST00000340424 A0A0D9SEW6 157 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 SNPHO15079 494 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 CCP110O43303 1012 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 LRIG2O94898 1065 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 FSBPO95073 299 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 GJB6O95452 261 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 CER1O95813 267 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 ZNF883P0CG24 379 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 PBX1P40424 430 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 GRIA4P48058 902 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 SERPINH1P50454 418 aaKnown RBP13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 CCR5P51681 352 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 GALCP54803 685 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 ADPRHP54922 357 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 RPL7AP62424 266 aaKnown RBP13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 GRIK2Q13002 908 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 SEMA3BQ13214 749 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 MAMLD1Q13495 774 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 UAP1L1Q3KQV9 507 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 PLEKHA7Q6IQ23 1121 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 RWDD4Q6NW29 188 aaKnown RBP13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 Q6ZVU0 165 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 ZNF571Q7Z3V5 609 aaPredicted RBP13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 NLRP14Q86W24 1093 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 AADATQ8N5Z0 425 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 CCDC185Q8N715 623 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 TMIEQ8NEW7 156 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 FNIP1Q8TF40 1166 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 SKA1Q96BD8 255 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 EPAS1Q99814 870 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 ACE2Q9BYF1 805 aaPredicted RBP13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 MAGEH1Q9H213 219 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 NEUROG2Q9H2A3 272 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 SERGEFQ9UGK8 458 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 HPCAL4Q9UM19 191 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 NCOR2Q9Y618 2525 aa13.64□□□□□ -0.23
SIRPB3P-201ENST00000340424 CNOT1A5YKK6 2376 aaKnown RBP13.63□□□□□ -0.23
SIRPB3P-201ENST00000340424 A0A1W2PPC4 97 aa13.63□□□□□ -0.23
SIRPB3P-201ENST00000340424 ZSCAN5CA6NGD5 496 aaPredicted RBP13.63□□□□□ -0.23
SIRPB3P-201ENST00000340424 C10orf142B7Z368 130 aa13.63□□□□□ -0.23
SIRPB3P-201ENST00000340424 CBX4O00257 560 aa13.63□□□□□ -0.23
SIRPB3P-201ENST00000340424 FGF10O15520 208 aaPredicted RBP13.63□□□□□ -0.23
SIRPB3P-201ENST00000340424 SNAP91O60641 907 aa13.63□□□□□ -0.23
SIRPB3P-201ENST00000340424 RTN2O75298 545 aa13.63□□□□□ -0.23
SIRPB3P-201ENST00000340424 PRNPP04156 253 aa13.63□□□□□ -0.23
SIRPB3P-201ENST00000340424 VAV1P15498 845 aa13.63□□□□□ -0.23
SIRPB3P-201ENST00000340424 RECQLP46063 649 aaPredicted RBP13.63□□□□□ -0.23
SIRPB3P-201ENST00000340424 NOVA1P51513 510 aaKnown RBP13.63□□□□□ -0.23
SIRPB3P-201ENST00000340424 ZBED6P86452 979 aa13.63□□□□□ -0.23
SIRPB3P-201ENST00000340424 PSAPL1Q6NUJ1 521 aa13.63□□□□□ -0.23
SIRPB3P-201ENST00000340424 C22orf39Q6P5X5 142 aa13.63□□□□□ -0.23
SIRPB3P-201ENST00000340424 NCEH1Q6PIU2 408 aa13.63□□□□□ -0.23
SIRPB3P-201ENST00000340424 TMC6Q7Z403 805 aa13.63□□□□□ -0.23
SIRPB3P-201ENST00000340424 DRC7Q8IY82 874 aa13.63□□□□□ -0.23
SIRPB3P-201ENST00000340424 PCDH20Q8N6Y1 951 aaKnown RBP13.63□□□□□ -0.23
SIRPB3P-201ENST00000340424 ISG20Q96AZ6 181 aaKnown RBP13.63□□□□□ -0.23
SIRPB3P-201ENST00000340424 SPON2Q9BUD6 331 aa13.63□□□□□ -0.23
SIRPB3P-201ENST00000340424 CATSPERBQ9H7T0 1116 aa13.63□□□□□ -0.23
SIRPB3P-201ENST00000340424 MRPL47Q9HD33 250 aaKnown RBP13.63□□□□□ -0.23
SIRPB3P-201ENST00000340424 TAS2R14Q9NYV8 317 aa13.63□□□□□ -0.23
SIRPB3P-201ENST00000340424 NEU3Q9UQ49 428 aa13.63□□□□□ -0.23
SIRPB3P-201ENST00000340424 TMCO5BA8MYB1 307 aa13.62□□□□□ -0.23
SIRPB3P-201ENST00000340424 PLRG1O43660 514 aaKnown RBP13.62□□□□□ -0.23
SIRPB3P-201ENST00000340424 RAMP2O60895 175 aa13.62□□□□□ -0.23
SIRPB3P-201ENST00000340424 GJB3O75712 270 aa13.62□□□□□ -0.23
SIRPB3P-201ENST00000340424 ZMPSTE24O75844 475 aa13.62□□□□□ -0.23
SIRPB3P-201ENST00000340424 MT-CO1P00395 513 aa13.62□□□□□ -0.23
SIRPB3P-201ENST00000340424 FTLP02792 175 aaPredicted RBP13.62□□□□□ -0.23
SIRPB3P-201ENST00000340424 IGHV4-34P06331 123 aa13.62□□□□□ -0.23
SIRPB3P-201ENST00000340424 DRD3P35462 400 aa13.62□□□□□ -0.23
SIRPB3P-201ENST00000340424 ZNF135P52742 658 aaPredicted RBP13.62□□□□□ -0.23
SIRPB3P-201ENST00000340424 RACK1P63244 317 aaKnown RBP13.62□□□□□ -0.23
SIRPB3P-201ENST00000340424 POLD3Q15054 466 aaPredicted RBP13.62□□□□□ -0.23
SIRPB3P-201ENST00000340424 RAB6CQ53S08 254 aa13.62□□□□□ -0.23
SIRPB3P-201ENST00000340424 SCYL2Q6P3W7 929 aa13.62□□□□□ -0.23
SIRPB3P-201ENST00000340424 PIP4P1Q86T03 277 aa13.62□□□□□ -0.23
SIRPB3P-201ENST00000340424 OR7D4Q8NG98 312 aa13.62□□□□□ -0.23
SIRPB3P-201ENST00000340424 OR2A12Q8NGT7 310 aa13.62□□□□□ -0.23
SIRPB3P-201ENST00000340424 OR14C36Q8NHC7 312 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms