RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 IYDQ6PHW0 289 aa14.92□□□□□ -0.02
RET-201ENST00000340058 STRADAQ7RTN6 431 aa14.92□□□□□ -0.02
RET-201ENST00000340058 FNIP1Q8TF40 1166 aa14.92□□□□□ -0.02
RET-201ENST00000340058 DDX1Q92499 740 aaKnown RBP14.92□□□□□ -0.02
RET-201ENST00000340058 ADGRE3Q9BY15 652 aa14.92□□□□□ -0.02
RET-201ENST00000340058 RAB6CQ9H0N0 254 aa14.92□□□□□ -0.02
RET-201ENST00000340058 WDR55Q9H6Y2 383 aaPredicted RBP14.92□□□□□ -0.02
RET-201ENST00000340058 SNX15Q9NRS6 342 aa14.92□□□□□ -0.02
RET-201ENST00000340058 XPR1Q9UBH6 696 aa14.92□□□□□ -0.02
RET-201ENST00000340058 SPASTQ9UBP0 616 aa14.92□□□□□ -0.02
RET-201ENST00000340058 MFHAS1Q9Y4C4 1052 aa14.92□□□□□ -0.02
RET-201ENST00000340058 MYH11P35749 1972 aa14.92□□□□□ -0.02
RET-201ENST00000340058 LZTS3O60299 673 aaPredicted RBP14.92□□□□□ -0.02
RET-201ENST00000340058 MYO1DO94832 1006 aa14.92□□□□□ -0.02
RET-201ENST00000340058 C2P06681 752 aa14.92□□□□□ -0.02
RET-201ENST00000340058 RBP1P09455 135 aa14.92□□□□□ -0.02
RET-201ENST00000340058 RPL9P32969 192 aaKnown RBP14.92□□□□□ -0.02
RET-201ENST00000340058 TUFMP49411 452 aaKnown RBP14.92□□□□□ -0.02
RET-201ENST00000340058 ELF3P78545 371 aaPredicted RBP14.92□□□□□ -0.02
RET-201ENST00000340058 LAMB3Q13751 1172 aa14.92□□□□□ -0.02
RET-201ENST00000340058 AGAP11Q8TF27 550 aa14.92□□□□□ -0.02
RET-201ENST00000340058 PPP1R2P1Q96PQ5 205 aa14.92□□□□□ -0.02
RET-201ENST00000340058 CDRT15Q96T59 188 aa14.92□□□□□ -0.02
RET-201ENST00000340058 C17orf80Q9BSJ5 609 aa14.92□□□□□ -0.02
RET-201ENST00000340058 ACTR8Q9H981 624 aa14.92□□□□□ -0.02
RET-201ENST00000340058 SLC13A4Q9UKG4 626 aa14.92□□□□□ -0.02
RET-201ENST00000340058 SF3B1O75533 1304 aaKnown RBP eCLIP14.92□□□□□ -0.02
RET-201ENST00000340058 A8MUI8 341 aa14.92□□□□□ -0.02
RET-201ENST00000340058 ZNF189O75820 626 aaPredicted RBP14.92□□□□□ -0.02
RET-201ENST00000340058 KRT16P08779 473 aa14.92□□□□□ -0.02
RET-201ENST00000340058 GRIK3Q13003 919 aa14.92□□□□□ -0.02
RET-201ENST00000340058 BNC2Q6ZN30 1099 aaPredicted RBP14.92□□□□□ -0.02
RET-201ENST00000340058 ZNF567Q8N184 647 aa14.92□□□□□ -0.02
RET-201ENST00000340058 ECSITQ9BQ95 431 aa14.92□□□□□ -0.02
RET-201ENST00000340058 CORO1BQ9BR76 489 aa14.92□□□□□ -0.02
RET-201ENST00000340058 CENPKQ9BS16 269 aa14.92□□□□□ -0.02
RET-201ENST00000340058 ZYG11BQ9C0D3 744 aa14.92□□□□□ -0.02
RET-201ENST00000340058 PCDHB9Q9Y5E1 797 aa14.92□□□□□ -0.02
RET-201ENST00000340058 TTC24A2A3L6 582 aaPredicted RBP14.91□□□□□ -0.02
RET-201ENST00000340058 KPNA3O00505 521 aaPredicted RBP14.91□□□□□ -0.02
RET-201ENST00000340058 CLASP2O75122 1294 aaKnown RBP14.91□□□□□ -0.02
RET-201ENST00000340058 MTA2O94776 668 aa14.91□□□□□ -0.02
RET-201ENST00000340058 ABHD2P08910 425 aa14.91□□□□□ -0.02
RET-201ENST00000340058 TFEBP19484 476 aa14.91□□□□□ -0.02
RET-201ENST00000340058 VHLP40337 213 aa14.91□□□□□ -0.02
RET-201ENST00000340058 STX5Q13190 355 aa14.91□□□□□ -0.02
RET-201ENST00000340058 HECTD3Q5T447 861 aa14.91□□□□□ -0.02
RET-201ENST00000340058 FBXO39Q8N4B4 442 aa14.91□□□□□ -0.02
RET-201ENST00000340058 CNBD2Q96M20 576 aa14.91□□□□□ -0.02
RET-201ENST00000340058 HAPLN2Q9GZV7 340 aa14.91□□□□□ -0.02
RET-201ENST00000340058 AAASQ9NRG9 546 aa14.91□□□□□ -0.02
RET-201ENST00000340058 SPATS2LQ9NUQ6 558 aaKnown RBP14.91□□□□□ -0.02
RET-201ENST00000340058 PTCH2Q9Y6C5 1203 aa14.91□□□□□ -0.02
RET-201ENST00000340058 CEP290O15078 2479 aa14.91□□□□□ -0.02
RET-201ENST00000340058 PITX1P78337 314 aaPredicted RBP14.91□□□□□ -0.02
RET-201ENST00000340058 PCID2Q5JVF3 399 aa14.91□□□□□ -0.02
RET-201ENST00000340058 VWA5B1Q5TIE3 1220 aa14.91□□□□□ -0.02
RET-201ENST00000340058 ANKS1BQ7Z6G8 1248 aa14.91□□□□□ -0.02
RET-201ENST00000340058 CYP2S1Q96SQ9 504 aa14.91□□□□□ -0.02
RET-201ENST00000340058 VAT1Q99536 393 aa14.91□□□□□ -0.02
RET-201ENST00000340058 CAAP1Q9H8G2 361 aa14.91□□□□□ -0.02
RET-201ENST00000340058 SEPT3Q9UH03 358 aa14.91□□□□□ -0.02
RET-201ENST00000340058 PCDHB12Q9Y5F1 795 aa14.91□□□□□ -0.02
RET-201ENST00000340058 PCDHA11Q9Y5I1 949 aa14.91□□□□□ -0.02
RET-201ENST00000340058 MYH8P13535 1937 aa14.91□□□□□ -0.02
RET-201ENST00000340058 LOC102724159A0A0B4J2E5 919 aa14.91□□□□□ -0.02
RET-201ENST00000340058 TPBGLP0DKB5 382 aa14.91□□□□□ -0.02
RET-201ENST00000340058 HDAC4P56524 1084 aa14.91□□□□□ -0.02
RET-201ENST00000340058 SEMG2Q02383 582 aa14.91□□□□□ -0.02
RET-201ENST00000340058 IKBKEQ14164 716 aa14.91□□□□□ -0.02
RET-201ENST00000340058 PWP2Q15269 919 aaKnown RBP14.91□□□□□ -0.02
RET-201ENST00000340058 PTPRNQ16849 979 aa14.91□□□□□ -0.02
RET-201ENST00000340058 SNX30Q5VWJ9 437 aa14.91□□□□□ -0.02
RET-201ENST00000340058 IZUMO2Q6UXV1 221 aa14.91□□□□□ -0.02
RET-201ENST00000340058 FAM228AQ86W67 206 aa14.91□□□□□ -0.02
RET-201ENST00000340058 MPP5Q8N3R9 675 aa14.91□□□□□ -0.02
RET-201ENST00000340058 FOPNLQ96NB1 174 aa14.91□□□□□ -0.02
RET-201ENST00000340058 BTBD10Q9BSF8 475 aa14.91□□□□□ -0.02
RET-201ENST00000340058 DCLRE1BQ9H816 532 aa14.91□□□□□ -0.02
RET-201ENST00000340058 TRPM3Q9HCF6 1732 aaPredicted RBP14.91□□□□□ -0.02
RET-201ENST00000340058 SYCE1LA8MT33 242 aa14.9□□□□□ -0.02
RET-201ENST00000340058 EDF1O60869 148 aaKnown RBP14.9□□□□□ -0.02
RET-201ENST00000340058 PIGRP01833 764 aa14.9□□□□□ -0.02
RET-201ENST00000340058 ZBTB48P10074 688 aaPredicted RBP14.9□□□□□ -0.02
RET-201ENST00000340058 ALADP13716 330 aa14.9□□□□□ -0.02
RET-201ENST00000340058 PRKAA1Q13131 559 aa14.9□□□□□ -0.02
RET-201ENST00000340058 GTF2H3Q13889 308 aa14.9□□□□□ -0.02
RET-201ENST00000340058 TEX44Q53QW1 395 aa14.9□□□□□ -0.02
RET-201ENST00000340058 MSL3Q8N5Y2 521 aaKnown RBP14.9□□□□□ -0.02
RET-201ENST00000340058 INPP5DQ92835 1189 aa14.9□□□□□ -0.02
RET-201ENST00000340058 COG4Q9H9E3 785 aa14.9□□□□□ -0.02
RET-201ENST00000340058 RP1L1Q8IWN7 2480 aaPredicted RBP14.9□□□□□ -0.02
RET-201ENST00000340058 MEIS3P2A8K0S8 358 aa14.9□□□□□ -0.02
RET-201ENST00000340058 RTN3O95197 1032 aaPredicted RBP14.9□□□□□ -0.02
RET-201ENST00000340058 PARNO95453 639 aaKnown RBP14.9□□□□□ -0.02
RET-201ENST00000340058 HSPA14Q0VDF9 509 aa14.9□□□□□ -0.02
RET-201ENST00000340058 NFYCQ13952 458 aa14.9□□□□□ -0.02
RET-201ENST00000340058 SPDYCQ5MJ68 293 aa14.9□□□□□ -0.02
RET-201ENST00000340058 RHBDF2Q6PJF5 856 aa14.9□□□□□ -0.02
RET-201ENST00000340058 PRSS55Q6UWB4 352 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms