RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 RNGTTO60942 597 aaKnown RBP10.92□□□□□ -0.66
CAPN3-202ENST00000337571 CNTN5O94779 1100 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 LSM8O95777 96 aaKnown RBP10.92□□□□□ -0.66
CAPN3-202ENST00000337571 PRNPP04156 253 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 SRCP12931 536 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 JUPP14923 745 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 EEF1GP26641 437 aaKnown RBP10.92□□□□□ -0.66
CAPN3-202ENST00000337571 CHRNA3P32297 505 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 CDH5P33151 784 aaPredicted RBP10.92□□□□□ -0.66
CAPN3-202ENST00000337571 HNF1BP35680 557 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 SCNN1AP37088 669 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 IRAK1P51617 712 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 NXPH1P58417 271 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 DPCR1Q3MIW9 517 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 ARL13BQ3SXY8 428 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 HS1BP3Q53T59 392 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 RETSATQ6NUM9 610 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 NEK5Q6P3R8 708 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 DHRS13Q6UX07 377 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 TMPRSS12Q86WS5 348 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 TRIM69Q86WT6 500 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 OR52K2Q8NGK3 314 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 MDM1Q8TC05 714 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 SAP25Q8TEE9 199 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 NT5C3BQ969T7 300 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 KLHDC7BQ96G42 594 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 PPP1R16AQ96I34 528 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 HAPLN3Q96S86 360 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 TBCBQ99426 244 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 SPON2Q9BUD6 331 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 STK33Q9BYT3 514 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 NUP62CLQ9H1M0 184 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 PREBQ9HCU5 417 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 ARHGAP20Q9P2F6 1191 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 HS3ST2Q9Y278 367 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 PCDHGA1Q9Y5H4 931 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 OR51B4Q9Y5P0 310 aa10.92□□□□□ -0.66
CAPN3-202ENST00000337571 FAM149AA5PLN7 773 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 DRGXA6NNA5 263 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 E9PAM4 449 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 CBX4O00257 560 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 DKK1O94907 266 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 PCDH8O95206 1070 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 MT-CO1P00395 513 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 CAPNS1P04632 268 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 UCHL3P15374 230 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 RXRGP48443 463 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 DNA2P51530 1060 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 METAP1P53582 386 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 PPP2CBP62714 309 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 PPP2CAP67775 309 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 SLC20A2Q08357 652 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 KCNMA1Q12791 1236 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 SMAD1Q15797 465 aaKnown RBP10.91□□□□□ -0.66
CAPN3-202ENST00000337571 ALFQ53S48 1182 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 TCP11X2Q5H9J9 407 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 MIIPQ5JXC2 388 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 ZNF783Q6ZMS7 281 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 TFAP2DQ7Z6R9 452 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 ZNF677Q86XU0 584 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 XYLT1Q86Y38 959 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 TMIEQ8NEW7 156 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 CPA5Q8WXQ8 436 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 ZYG11BQ9C0D3 744 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 SAMSN1Q9NSI8 373 aaKnown RBP10.91□□□□□ -0.66
CAPN3-202ENST00000337571 MPP6Q9NZW5 540 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 IL36AQ9UHA7 158 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 VPS51Q9UID3 782 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 SNX10Q9Y5X0 201 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 FHOD1Q9Y613 1164 aa10.91□□□□□ -0.66
CAPN3-202ENST00000337571 A0A0D9SEW6 157 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 A0A1W2PQU0 124 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 FAM170AA1A519 330 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 ILVBLA1L0T0 632 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 K7ERQ8 282 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 SLC31A1O15431 190 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 SNAP91O60641 907 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 RFPL3O75679 317 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 MMEP08473 750 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 TFE3P19532 575 aaPredicted RBP10.9□□□□□ -0.66
CAPN3-202ENST00000337571 RRM1P23921 792 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 EPHA8P29322 1005 aaPredicted RBP10.9□□□□□ -0.66
CAPN3-202ENST00000337571 AKT2P31751 481 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 ATP11AP98196 1134 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 CYP4F3Q08477 520 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 BNIP3Q12983 259 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 ILKQ13418 452 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 SHBQ15464 509 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 FKBP15Q5T1M5 1219 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 AGBL4Q5VU57 503 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 C19orf48Q6RUI8 117 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 LINGO4Q6UY18 593 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 ARCQ7LC44 396 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 NOP9Q86U38 636 aaKnown RBP10.9□□□□□ -0.66
CAPN3-202ENST00000337571 ZNF454Q8N9F8 522 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 DCAF4L2Q8NA75 395 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 OR2A12Q8NGT7 310 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 FAM131CQ96AQ9 280 aa10.9□□□□□ -0.66
CAPN3-202ENST00000337571 PCMTD1Q96MG8 357 aaPredicted RBP10.9□□□□□ -0.66
CAPN3-202ENST00000337571 CFAP57Q96MR6 1250 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms