RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 KBTBD4Q9NVX7 518 aa15.22■□□□□ 0.03
CTHRC1-201ENST00000330295 DKK3Q9UBP4 350 aa15.22■□□□□ 0.03
CTHRC1-201ENST00000330295 KLF15Q9UIH9 416 aa15.22■□□□□ 0.03
CTHRC1-201ENST00000330295 PADI4Q9UM07 663 aa15.22■□□□□ 0.03
CTHRC1-201ENST00000330295 ZDHHC9Q9Y397 364 aa15.22■□□□□ 0.03
CTHRC1-201ENST00000330295 HBS1LQ9Y450 684 aaKnown RBP15.22■□□□□ 0.03
CTHRC1-201ENST00000330295 CELSR1Q9NYQ6 3014 aa15.22■□□□□ 0.03
CTHRC1-201ENST00000330295 SPTY2D1-AS1A0A0U1RR47 76 aa15.21■□□□□ 0.03
CTHRC1-201ENST00000330295 VAV1P15498 845 aa15.21■□□□□ 0.03
CTHRC1-201ENST00000330295 MAPK10P53779 464 aa15.21■□□□□ 0.03
CTHRC1-201ENST00000330295 ECT2LQ008S8 904 aa15.21■□□□□ 0.03
CTHRC1-201ENST00000330295 PSMD6Q15008 389 aa15.21■□□□□ 0.03
CTHRC1-201ENST00000330295 E2F4Q16254 413 aa15.21■□□□□ 0.03
CTHRC1-201ENST00000330295 PITRM1Q5JRX3 1037 aa15.21■□□□□ 0.03
CTHRC1-201ENST00000330295 FAM46CQ5VWP2 391 aa15.21■□□□□ 0.03
CTHRC1-201ENST00000330295 RNF219Q5W0B1 726 aaPredicted RBP15.21■□□□□ 0.03
CTHRC1-201ENST00000330295 UNC93AQ86WB7 457 aa15.21■□□□□ 0.03
CTHRC1-201ENST00000330295 EFCAB3Q8N7B9 438 aa15.21■□□□□ 0.03
CTHRC1-201ENST00000330295 TMEM159Q96B96 161 aa15.21■□□□□ 0.03
CTHRC1-201ENST00000330295 ELMO3Q96BJ8 720 aa15.21■□□□□ 0.03
CTHRC1-201ENST00000330295 CCDC127Q96BQ5 260 aa15.21■□□□□ 0.03
CTHRC1-201ENST00000330295 CYFIP2Q96F07 1278 aa15.21■□□□□ 0.03
CTHRC1-201ENST00000330295 RPL10LQ96L21 214 aaKnown RBP15.21■□□□□ 0.03
CTHRC1-201ENST00000330295 SRRTQ9BXP5 876 aaKnown RBP15.21■□□□□ 0.03
CTHRC1-201ENST00000330295 IRX2Q9BZI1 471 aaPredicted RBP15.21■□□□□ 0.03
CTHRC1-201ENST00000330295 DONSONQ9NYP3 566 aa15.21■□□□□ 0.03
CTHRC1-201ENST00000330295 STIM2Q9P246 746 aa15.21■□□□□ 0.03
CTHRC1-201ENST00000330295 CEP83Q9Y592 693 aa15.21■□□□□ 0.03
CTHRC1-201ENST00000330295 HIVEP1P15822 2718 aa15.21■□□□□ 0.02
CTHRC1-201ENST00000330295 UNC13CQ8NB66 2214 aa15.2■□□□□ 0.02
CTHRC1-201ENST00000330295 ZNF891A8MT65 544 aaPredicted RBP15.2■□□□□ 0.02
CTHRC1-201ENST00000330295 STMND1H3BQB6 276 aa15.2■□□□□ 0.02
CTHRC1-201ENST00000330295 AGRPO00253 132 aa15.2■□□□□ 0.02
CTHRC1-201ENST00000330295 PHACTR2O75167 634 aa15.2■□□□□ 0.02
CTHRC1-201ENST00000330295 KIF20AO95235 890 aa15.2■□□□□ 0.02
CTHRC1-201ENST00000330295 LIFP15018 202 aa15.2■□□□□ 0.02
CTHRC1-201ENST00000330295 JUNDP17535 347 aa15.2■□□□□ 0.02
CTHRC1-201ENST00000330295 NOS2P35228 1153 aa15.2■□□□□ 0.02
CTHRC1-201ENST00000330295 YWHAGP61981 247 aaKnown RBP eCLIP15.2■□□□□ 0.02
CTHRC1-201ENST00000330295 SNRNP35Q16560 246 aaKnown RBP15.2■□□□□ 0.02
CTHRC1-201ENST00000330295 NUGGCQ68CJ6 796 aa15.2■□□□□ 0.02
CTHRC1-201ENST00000330295 NEK5Q6P3R8 708 aa15.2■□□□□ 0.02
CTHRC1-201ENST00000330295 CNNM4Q6P4Q7 775 aa15.2■□□□□ 0.02
CTHRC1-201ENST00000330295 MMS22LQ6ZRQ5 1243 aa15.2■□□□□ 0.02
CTHRC1-201ENST00000330295 SV2AQ7L0J3 742 aa15.2■□□□□ 0.02
CTHRC1-201ENST00000330295 HORMAD1Q86X24 394 aa15.2■□□□□ 0.02
CTHRC1-201ENST00000330295 TEX19Q8NA77 164 aa15.2■□□□□ 0.02
CTHRC1-201ENST00000330295 NKD1Q969G9 470 aa15.2■□□□□ 0.02
CTHRC1-201ENST00000330295 CCDC47Q96A33 483 aaKnown RBP15.2■□□□□ 0.02
CTHRC1-201ENST00000330295 HEXIM2Q96MH2 286 aaKnown RBP15.2■□□□□ 0.02
CTHRC1-201ENST00000330295 EPAS1Q99814 870 aa15.2■□□□□ 0.02
CTHRC1-201ENST00000330295 C7orf25Q9BPX7 421 aa15.2■□□□□ 0.02
CTHRC1-201ENST00000330295 B3GNT4Q9C0J1 378 aa15.2■□□□□ 0.02
CTHRC1-201ENST00000330295 RABGEF1Q9UJ41 708 aa15.2■□□□□ 0.02
CTHRC1-201ENST00000330295 NAV3Q8IVL0 2385 aa15.2■□□□□ 0.02
CTHRC1-201ENST00000330295 PDZD2O15018 2839 aa15.19■□□□□ 0.02
CTHRC1-201ENST00000330295 A0A1W2PQM1 296 aa15.19■□□□□ 0.02
CTHRC1-201ENST00000330295 FRMD3A2A2Y4 597 aa15.19■□□□□ 0.02
CTHRC1-201ENST00000330295 RPLP0P05388 317 aaKnown RBP15.19■□□□□ 0.02
CTHRC1-201ENST00000330295 TRIM21P19474 475 aaKnown RBP15.19■□□□□ 0.02
CTHRC1-201ENST00000330295 ANP32AP39687 249 aaKnown RBP15.19■□□□□ 0.02
CTHRC1-201ENST00000330295 STK19P49842 368 aaPredicted RBP15.19■□□□□ 0.02
CTHRC1-201ENST00000330295 CCL7P80098 99 aa15.19■□□□□ 0.02
CTHRC1-201ENST00000330295 CYP24A1Q07973 514 aa15.19■□□□□ 0.02
CTHRC1-201ENST00000330295 FGL2Q14314 439 aa15.19■□□□□ 0.02
CTHRC1-201ENST00000330295 ESRP1Q6NXG1 681 aaKnown RBP15.19■□□□□ 0.02
CTHRC1-201ENST00000330295 SDR16C5Q8N3Y7 309 aa15.19■□□□□ 0.02
CTHRC1-201ENST00000330295 GPBAR1Q8TDU6 330 aa15.19■□□□□ 0.02
CTHRC1-201ENST00000330295 OR8D1Q8WZ84 308 aa15.19■□□□□ 0.02
CTHRC1-201ENST00000330295 BMFQ96LC9 184 aa15.19■□□□□ 0.02
CTHRC1-201ENST00000330295 CMKLR1Q99788 373 aa15.19■□□□□ 0.02
CTHRC1-201ENST00000330295 CPEB1Q9BZB8 566 aaKnown RBP15.19■□□□□ 0.02
CTHRC1-201ENST00000330295 PRDM8Q9NQV8 689 aa15.19■□□□□ 0.02
CTHRC1-201ENST00000330295 OLA1Q9NTK5 396 aaKnown RBP15.19■□□□□ 0.02
CTHRC1-201ENST00000330295 TP53TG5Q9Y2B4 290 aa15.19■□□□□ 0.02
CTHRC1-201ENST00000330295 HS3ST3A1Q9Y663 406 aa15.19■□□□□ 0.02
CTHRC1-201ENST00000330295 GOLGA6L7A0A1B0GV03 622 aa15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 PVALEFA0A1B0GWK0 134 aa15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 IRAK2O43187 625 aa15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 GCATO75600 419 aa15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 CNTN5O94779 1100 aa15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 MOCS3O95396 460 aa15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 MYL1P05976 194 aa15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 ITGB7P26010 798 aa15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 SYKP43405 635 aa15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 CDH18Q13634 790 aa15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 FAM133BQ5BKY9 247 aaKnown RBP15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 FSCBQ5H9T9 825 aa15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 PIP5KL1Q5T9C9 394 aa15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 TMEM164Q5U3C3 297 aa15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 KYAT3Q6YP21 454 aaKnown RBP15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 UNC13DQ70J99 1090 aa15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 CARNMT1Q8N4J0 409 aa15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 IL22RA1Q8N6P7 574 aa15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 HJURPQ8NCD3 748 aaPredicted RBP15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 APOBEC4Q8WW27 367 aaKnown RBP15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 CCDC74AQ96AQ1 378 aa15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 POM121Q96HA1 1249 aa15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 DUSP16Q9BY84 665 aa15.18■□□□□ 0.02
CTHRC1-201ENST00000330295 CASS4Q9NQ75 786 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms