RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 GLDCP23378 1020 aa15.15■□□□□ 0.02
CLRN1-203ENST00000328863 ACVRL1P37023 503 aa15.15■□□□□ 0.02
CLRN1-203ENST00000328863 LMNB2Q03252 620 aa15.15■□□□□ 0.02
CLRN1-203ENST00000328863 SLC20A2Q08357 652 aa15.15■□□□□ 0.02
CLRN1-203ENST00000328863 SPEM2Q0P670 501 aa15.15■□□□□ 0.02
CLRN1-203ENST00000328863 KRT81Q14533 505 aa15.15■□□□□ 0.02
CLRN1-203ENST00000328863 KCNT1Q5JUK3 1230 aa15.15■□□□□ 0.02
CLRN1-203ENST00000328863 FAM46CQ5VWP2 391 aa15.15■□□□□ 0.02
CLRN1-203ENST00000328863 LINGO4Q6UY18 593 aa15.15■□□□□ 0.02
CLRN1-203ENST00000328863 USP30Q70CQ3 517 aa15.15■□□□□ 0.02
CLRN1-203ENST00000328863 ARMCX6Q7L4S7 300 aa15.15■□□□□ 0.02
CLRN1-203ENST00000328863 MMAAQ8IVH4 418 aaKnown RBP15.15■□□□□ 0.02
CLRN1-203ENST00000328863 TMEFF1Q8IYR6 380 aa15.15■□□□□ 0.02
CLRN1-203ENST00000328863 STK40Q8N2I9 435 aa15.15■□□□□ 0.02
CLRN1-203ENST00000328863 PCDH20Q8N6Y1 951 aaKnown RBP15.15■□□□□ 0.02
CLRN1-203ENST00000328863 FOXJ1Q92949 421 aa15.15■□□□□ 0.02
CLRN1-203ENST00000328863 TOE1Q96GM8 510 aaKnown RBP15.15■□□□□ 0.02
CLRN1-203ENST00000328863 HSPA12BQ96MM6 686 aa15.15■□□□□ 0.02
CLRN1-203ENST00000328863 MAGEB5Q9BZ81 275 aa15.15■□□□□ 0.02
CLRN1-203ENST00000328863 PCED1AQ9H1Q7 454 aa15.15■□□□□ 0.02
CLRN1-203ENST00000328863 ARRDC1-AS1Q9H2J1 176 aa15.15■□□□□ 0.02
CLRN1-203ENST00000328863 IMPACTQ9P2X3 320 aa15.15■□□□□ 0.02
CLRN1-203ENST00000328863 BNIP3LO60238 219 aa15.14■□□□□ 0.01
CLRN1-203ENST00000328863 ZMPSTE24O75844 475 aa15.14■□□□□ 0.01
CLRN1-203ENST00000328863 MTA2O94776 668 aa15.14■□□□□ 0.01
CLRN1-203ENST00000328863 IL1BP01584 269 aa15.14■□□□□ 0.01
CLRN1-203ENST00000328863 VAV1P15498 845 aa15.14■□□□□ 0.01
CLRN1-203ENST00000328863 C5AR1P21730 350 aa15.14■□□□□ 0.01
CLRN1-203ENST00000328863 IL1R2P27930 398 aa15.14■□□□□ 0.01
CLRN1-203ENST00000328863 SERPINB6P35237 376 aa15.14■□□□□ 0.01
CLRN1-203ENST00000328863 HOXD12P35452 270 aa15.14■□□□□ 0.01
CLRN1-203ENST00000328863 GJC1P36383 396 aa15.14■□□□□ 0.01
CLRN1-203ENST00000328863 NDST2P52849 883 aa15.14■□□□□ 0.01
CLRN1-203ENST00000328863 RABEPKQ7Z6M1 372 aa15.14■□□□□ 0.01
CLRN1-203ENST00000328863 TMTC1Q8IUR5 882 aa15.14■□□□□ 0.01
CLRN1-203ENST00000328863 UMODL1-AS1Q8N2C9 162 aa15.14■□□□□ 0.01
CLRN1-203ENST00000328863 DCLK2Q8N568 766 aa15.14■□□□□ 0.01
CLRN1-203ENST00000328863 FRMD1Q8N878 549 aa15.14■□□□□ 0.01
CLRN1-203ENST00000328863 C12orf50Q8NA57 414 aaPredicted RBP15.14■□□□□ 0.01
CLRN1-203ENST00000328863 GANCQ8TET4 914 aa15.14■□□□□ 0.01
CLRN1-203ENST00000328863 CASKIN2Q8WXE0 1202 aa15.14■□□□□ 0.01
CLRN1-203ENST00000328863 HMCESQ96FZ2 354 aa15.14■□□□□ 0.01
CLRN1-203ENST00000328863 BTBD1Q9H0C5 482 aa15.14■□□□□ 0.01
CLRN1-203ENST00000328863 SGK2Q9HBY8 427 aa15.14■□□□□ 0.01
CLRN1-203ENST00000328863 OSGEPQ9NPF4 335 aa15.14■□□□□ 0.01
CLRN1-203ENST00000328863 VPS45Q9NRW7 570 aa15.14■□□□□ 0.01
CLRN1-203ENST00000328863 SEMA4GQ9NTN9 838 aa15.14■□□□□ 0.01
CLRN1-203ENST00000328863 WSB2Q9NYS7 404 aaPredicted RBP15.14■□□□□ 0.01
CLRN1-203ENST00000328863 RCOR3Q9P2K3 495 aaPredicted RBP15.14■□□□□ 0.01
CLRN1-203ENST00000328863 FZD4Q9ULV1 537 aa15.14■□□□□ 0.01
CLRN1-203ENST00000328863 SDK1Q7Z5N4 2213 aa15.13■□□□□ 0.01
CLRN1-203ENST00000328863 EP300Q09472 2414 aaPredicted RBP15.13■□□□□ 0.01
CLRN1-203ENST00000328863 BCLAF3A2AJT9 711 aaKnown RBP15.13■□□□□ 0.01
CLRN1-203ENST00000328863 ARHGAP42A6NI28 874 aa15.13■□□□□ 0.01
CLRN1-203ENST00000328863 TMEM110-MUSTN1A8MSY1 372 aa15.13■□□□□ 0.01
CLRN1-203ENST00000328863 RASA4BC9J798 803 aa15.13■□□□□ 0.01
CLRN1-203ENST00000328863 MID1O15344 667 aa15.13■□□□□ 0.01
CLRN1-203ENST00000328863 RASA4O43374 803 aa15.13■□□□□ 0.01
CLRN1-203ENST00000328863 LCA5LO95447 670 aa15.13■□□□□ 0.01
CLRN1-203ENST00000328863 KRT7P08729 469 aa15.13■□□□□ 0.01
CLRN1-203ENST00000328863 RARAP10276 462 aa15.13■□□□□ 0.01
CLRN1-203ENST00000328863 TCF4P15884 667 aa15.13■□□□□ 0.01
CLRN1-203ENST00000328863 FECHP22830 423 aa15.13■□□□□ 0.01
CLRN1-203ENST00000328863 ZNF33AQ06730 810 aa15.13■□□□□ 0.01
CLRN1-203ENST00000328863 CSRP2Q16527 193 aa15.13■□□□□ 0.01
CLRN1-203ENST00000328863 WDR45BQ5MNZ6 344 aa15.13■□□□□ 0.01
CLRN1-203ENST00000328863 SYCP2LQ5T4T6 812 aa15.13■□□□□ 0.01
CLRN1-203ENST00000328863 TMCO3Q6UWJ1 677 aa15.13■□□□□ 0.01
CLRN1-203ENST00000328863 PRR23CQ6ZRP0 262 aa15.13■□□□□ 0.01
CLRN1-203ENST00000328863 FAM124AQ86V42 546 aa15.13■□□□□ 0.01
CLRN1-203ENST00000328863 CADM4Q8NFZ8 388 aa15.13■□□□□ 0.01
CLRN1-203ENST00000328863 SLC35G2Q8TBE7 412 aa15.13■□□□□ 0.01
CLRN1-203ENST00000328863 OMDQ99983 421 aa15.13■□□□□ 0.01
CLRN1-203ENST00000328863 GPR174Q9BXC1 333 aa15.13■□□□□ 0.01
CLRN1-203ENST00000328863 SP110Q9HB58 689 aa15.13■□□□□ 0.01
CLRN1-203ENST00000328863 FBXL12Q9NXK8 326 aa15.13■□□□□ 0.01
CLRN1-203ENST00000328863 ATXN2Q99700 1313 aaKnown RBP15.13■□□□□ 0.01
CLRN1-203ENST00000328863 A0A1W2PP55 124 aa15.12■□□□□ 0.01
CLRN1-203ENST00000328863 K7ERQ8 282 aa15.12■□□□□ 0.01
CLRN1-203ENST00000328863 MCF2LO15068 1137 aa15.12■□□□□ 0.01
CLRN1-203ENST00000328863 KDELR3O43731 214 aa15.12■□□□□ 0.01
CLRN1-203ENST00000328863 RNASEH2AO75792 299 aaKnown RBP15.12■□□□□ 0.01
CLRN1-203ENST00000328863 SEMA4FO95754 770 aa15.12■□□□□ 0.01
CLRN1-203ENST00000328863 MT-CO1P00395 513 aa15.12■□□□□ 0.01
CLRN1-203ENST00000328863 PRNPP04156 253 aa15.12■□□□□ 0.01
CLRN1-203ENST00000328863 ERCC2P18074 760 aa15.12■□□□□ 0.01
CLRN1-203ENST00000328863 SLC8A1P32418 973 aa15.12■□□□□ 0.01
CLRN1-203ENST00000328863 ARHGAP25P42331 645 aa15.12■□□□□ 0.01
CLRN1-203ENST00000328863 PTGER3P43115 390 aa15.12■□□□□ 0.01
CLRN1-203ENST00000328863 MAGEA1P43355 309 aa15.12■□□□□ 0.01
CLRN1-203ENST00000328863 HCAR3P49019 387 aa15.12■□□□□ 0.01
CLRN1-203ENST00000328863 CDH6P55285 790 aa15.12■□□□□ 0.01
CLRN1-203ENST00000328863 DPYSQ14117 519 aa15.12■□□□□ 0.01
CLRN1-203ENST00000328863 MESDQ14696 234 aa15.12■□□□□ 0.01
CLRN1-203ENST00000328863 NUMA1Q14980 2115 aa15.12■□□□□ 0.01
CLRN1-203ENST00000328863 ZFYVE27Q5T4F4 411 aa15.12■□□□□ 0.01
CLRN1-203ENST00000328863 PEAR1Q5VY43 1037 aaPredicted RBP15.12■□□□□ 0.01
CLRN1-203ENST00000328863 POLNQ7Z5Q5 900 aa15.12■□□□□ 0.01
CLRN1-203ENST00000328863 SYT12Q8IV01 421 aa15.12■□□□□ 0.01
CLRN1-203ENST00000328863 KIAA2013Q8IYS2 634 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms