RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 PGGT1BP53609 377 aa12.02□□□□□ -0.49
DDR1-223ENST00000324771 EPHB3P54753 998 aa12.02□□□□□ -0.49
DDR1-223ENST00000324771 PKNOX1P55347 436 aa12.02□□□□□ -0.49
DDR1-223ENST00000324771 SMAD3P84022 425 aaKnown RBP12.02□□□□□ -0.49
DDR1-223ENST00000324771 C10orf107Q8IVU9 208 aa12.02□□□□□ -0.49
DDR1-223ENST00000324771 TP53INP2Q8IXH6 220 aa12.02□□□□□ -0.49
DDR1-223ENST00000324771 TLCD1Q96CP7 247 aa12.02□□□□□ -0.49
DDR1-223ENST00000324771 THAP1Q9NVV9 213 aa12.02□□□□□ -0.49
DDR1-223ENST00000324771 RABGEF1Q9UJ41 708 aa12.02□□□□□ -0.49
DDR1-223ENST00000324771 CHKBQ9Y259 395 aa12.02□□□□□ -0.49
DDR1-223ENST00000324771 FARP1Q9Y4F1 1045 aaPredicted RBP12.02□□□□□ -0.49
DDR1-223ENST00000324771 PTCH2Q9Y6C5 1203 aa12.02□□□□□ -0.49
DDR1-223ENST00000324771 ANKRD36CQ5JPF3 1778 aa12.02□□□□□ -0.49
DDR1-223ENST00000324771 SERPIND1P05546 499 aa12.02□□□□□ -0.49
DDR1-223ENST00000324771 ZCCHC18P0CG32 403 aa12.02□□□□□ -0.49
DDR1-223ENST00000324771 CTPS1P17812 591 aa12.02□□□□□ -0.49
DDR1-223ENST00000324771 EPHA3P29320 983 aa12.02□□□□□ -0.49
DDR1-223ENST00000324771 PURAQ00577 322 aaKnown RBP12.02□□□□□ -0.49
DDR1-223ENST00000324771 SLC25A11Q02978 314 aaKnown RBP12.02□□□□□ -0.49
DDR1-223ENST00000324771 ELAVL2Q12926 359 aaKnown RBP12.02□□□□□ -0.49
DDR1-223ENST00000324771 ZNF460Q14592 562 aa12.02□□□□□ -0.49
DDR1-223ENST00000324771 TEX44Q53QW1 395 aa12.02□□□□□ -0.49
DDR1-223ENST00000324771 INTS6LQ5JSJ4 861 aaKnown RBP12.02□□□□□ -0.49
DDR1-223ENST00000324771 VWA5B1Q5TIE3 1220 aa12.02□□□□□ -0.49
DDR1-223ENST00000324771 DCBLD1Q8N8Z6 715 aa12.02□□□□□ -0.49
DDR1-223ENST00000324771 SLC35F5Q8WV83 523 aa12.02□□□□□ -0.49
DDR1-223ENST00000324771 TMEM209Q96SK2 561 aa12.02□□□□□ -0.49
DDR1-223ENST00000324771 SH3GL3Q99963 347 aa12.02□□□□□ -0.49
DDR1-223ENST00000324771 NCKIPSDQ9NZQ3 722 aa12.02□□□□□ -0.49
DDR1-223ENST00000324771 DDHD2O94830 711 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 ATP6V1G2O95670 118 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 C2P06681 752 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 ABHD2P08910 425 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 CSH1P0DML2 217 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 CSH2P0DML3 217 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 CCND1P24385 295 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 SERPINH1P50454 418 aaKnown RBP12.01□□□□□ -0.49
DDR1-223ENST00000324771 IRX1P78414 480 aaPredicted RBP12.01□□□□□ -0.49
DDR1-223ENST00000324771 DNAL1Q4LDG9 190 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 OLFML1Q6UWY5 402 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 VSTM1Q6UX27 236 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 SCUBE1Q8IWY4 988 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 SUGP1Q8IWZ8 645 aaKnown RBP12.01□□□□□ -0.49
DDR1-223ENST00000324771 DNAJC9Q8WXX5 260 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 SH3KBP1Q96B97 665 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 TBC1D10AQ9BXI6 508 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 BCO2Q9BYV7 579 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 HIPK3Q9H422 1215 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 SNX15Q9NRS6 342 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 FBXO5Q9UKT4 447 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 RP1L1Q8IWN7 2480 aaPredicted RBP12.01□□□□□ -0.49
DDR1-223ENST00000324771 GRIN2DO15399 1336 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 SF3B1O75533 1304 aaKnown RBP eCLIP12.01□□□□□ -0.496e-6■■■■■ 122.4
DDR1-223ENST00000324771 CA12O43570 354 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 ESRRBO95718 433 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 LMNAP02545 664 aaKnown RBP12.01□□□□□ -0.49
DDR1-223ENST00000324771 KRT16P08779 473 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 PTPN4P29074 926 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 HOXA11P31270 313 aaPredicted RBP12.01□□□□□ -0.49
DDR1-223ENST00000324771 NPY2RP49146 381 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 GATMP50440 423 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 SPANXN3Q5MJ09 141 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 SPDYCQ5MJ68 293 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 LDLRAD1Q5T700 205 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 ECHDC2Q86YB7 292 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 IGDCC3Q8IVU1 814 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 SLC44A1Q8WWI5 657 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 AUTS2Q8WXX7 1259 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 LRRC39Q96DD0 335 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 CPNE1Q99829 537 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 PTPN18Q99952 460 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 WDR55Q9H6Y2 383 aaPredicted RBP12.01□□□□□ -0.49
DDR1-223ENST00000324771 NSMCE4AQ9NXX6 385 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 UBA2Q9UBT2 640 aaPredicted RBP12.01□□□□□ -0.49
DDR1-223ENST00000324771 PNMA8BQ9ULN7 279 aaPredicted RBP12.01□□□□□ -0.49
DDR1-223ENST00000324771 DERAQ9Y315 318 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 PCDHA11Q9Y5I1 949 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 NUMA1Q14980 2115 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 AKAP10O43572 662 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 HIST1H2AGP0C0S8 130 aaPredicted RBP12.01□□□□□ -0.49
DDR1-223ENST00000324771 HIST1H2ADP20671 130 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 GMPRP36959 345 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 ST8SIA6P61647 398 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 FLOT2Q14254 428 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 VARS2Q5ST30 1063 aaKnown RBP12.01□□□□□ -0.49
DDR1-223ENST00000324771 GRTP1Q5TC63 336 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 GLT6D1Q7Z4J2 308 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 OR7D4Q8NG98 312 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 HIST1H2AHQ96KK5 128 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 HIST1H2AJQ99878 128 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 H2AFJQ9BTM1 129 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 TRIM54Q9BYV2 358 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 IL22Q9GZX6 179 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 ADAMTS7Q9UKP4 1686 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 IGKV6D-21A0A0A0MT36 114 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 EDF1O60869 148 aaKnown RBP12.01□□□□□ -0.49
DDR1-223ENST00000324771 ACLYP53396 1101 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 ELF3P78545 371 aaPredicted RBP12.01□□□□□ -0.49
DDR1-223ENST00000324771 DSC2Q02487 901 aa12.01□□□□□ -0.49
DDR1-223ENST00000324771 PFKFB4Q16877 469 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms