RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 FARP1Q9Y4F1 1045 aaPredicted RBP14.29□□□□□ -0.12
SDC2-201ENST00000302190 PLIN3O60664 434 aa14.29□□□□□ -0.12
SDC2-201ENST00000302190 ITGBL1O95965 494 aaPredicted RBP14.29□□□□□ -0.12
SDC2-201ENST00000302190 OAS1P00973 400 aaKnown RBP14.29□□□□□ -0.12
SDC2-201ENST00000302190 SLC26A2P50443 739 aa14.29□□□□□ -0.12
SDC2-201ENST00000302190 AQP4P55087 323 aa14.29□□□□□ -0.12
SDC2-201ENST00000302190 PPM1LQ5SGD2 360 aa14.29□□□□□ -0.12
SDC2-201ENST00000302190 SCIMPQ6UWF3 145 aa14.29□□□□□ -0.12
SDC2-201ENST00000302190 ABI1Q8IZP0 508 aa14.29□□□□□ -0.12
SDC2-201ENST00000302190 LRRC39Q96DD0 335 aa14.29□□□□□ -0.12
SDC2-201ENST00000302190 TUBGCP5Q96RT8 1024 aa14.29□□□□□ -0.12
SDC2-201ENST00000302190 COPG2Q9UBF2 871 aa14.29□□□□□ -0.12
SDC2-201ENST00000302190 RALGDSQ12967 914 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 SGO1Q5FBB7 561 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 SYPL2Q5VXT5 272 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 NET1Q7Z628 596 aaPredicted RBP14.28□□□□□ -0.12
SDC2-201ENST00000302190 CAND1Q86VP6 1230 aaKnown RBP14.28□□□□□ -0.12
SDC2-201ENST00000302190 ZNF567Q8N184 647 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 B3GALNT2Q8NCR0 500 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 MCRS1Q96EZ8 462 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 CDHR5Q9HBB8 845 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 ARHGEF4Q9NR80 690 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 ATXN10Q9UBB4 475 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 SUN2Q9UH99 717 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 AFF4Q9UHB7 1163 aaKnown RBP14.28□□□□□ -0.12
SDC2-201ENST00000302190 ABLIM1O14639 778 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 MAGEA10P43363 369 aaPredicted RBP14.28□□□□□ -0.12
SDC2-201ENST00000302190 NR2C2P49116 596 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 PDK3Q15120 406 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 UGP2Q16851 508 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 LDLRAD1Q5T700 205 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 RPS27LQ71UM5 84 aaKnown RBP14.28□□□□□ -0.12
SDC2-201ENST00000302190 ANKRD52Q8NB46 1076 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 PANX3Q96QZ0 392 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 WDR41Q9HAD4 459 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 DMAP1Q9NPF5 467 aaPredicted RBP14.28□□□□□ -0.12
SDC2-201ENST00000302190 EFR3BQ9Y2G0 817 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 PAPPA2Q9BXP8 1791 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 TP73O15350 636 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 DDHD2O94830 711 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 CRHR1P34998 444 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 GABRB2P47870 512 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 ALDH1A3P47895 512 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 PHEXP78562 749 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 CDC16Q13042 620 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 PPIL2Q13356 520 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 MYBPC3Q14896 1274 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 KYAT1Q16773 422 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 FSTL4Q6MZW2 842 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 WNT8BQ93098 351 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 NCLNQ969V3 563 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 THEGQ9P2T0 379 aa14.28□□□□□ -0.12
SDC2-201ENST00000302190 IQCF3P0C7M6 154 aa14.27□□□□□ -0.12
SDC2-201ENST00000302190 PTPN1P18031 435 aaKnown RBP14.27□□□□□ -0.12
SDC2-201ENST00000302190 SFSWAPQ12872 951 aaKnown RBP14.27□□□□□ -0.12
SDC2-201ENST00000302190 TCEAL1Q15170 157 aa14.27□□□□□ -0.12
SDC2-201ENST00000302190 TBCCQ15814 346 aa14.27□□□□□ -0.12
SDC2-201ENST00000302190 ARL13AQ5H913 290 aaPredicted RBP14.27□□□□□ -0.12
SDC2-201ENST00000302190 TAS2R42Q7RTR8 314 aa14.27□□□□□ -0.12
SDC2-201ENST00000302190 SPATA2LQ8IUW3 424 aaPredicted RBP14.27□□□□□ -0.12
SDC2-201ENST00000302190 PQLC3Q8N755 202 aa14.27□□□□□ -0.12
SDC2-201ENST00000302190 MS4A4AQ96JQ5 239 aa14.27□□□□□ -0.12
SDC2-201ENST00000302190 TRAPPC9Q96Q05 1148 aa14.27□□□□□ -0.12
SDC2-201ENST00000302190 OXCT2Q9BYC2 517 aaPredicted RBP14.27□□□□□ -0.12
SDC2-201ENST00000302190 RNF39Q9H2S5 420 aa14.27□□□□□ -0.12
SDC2-201ENST00000302190 NCKIPSDQ9NZQ3 722 aa14.27□□□□□ -0.12
SDC2-201ENST00000302190 MPP6Q9NZW5 540 aa14.27□□□□□ -0.12
SDC2-201ENST00000302190 RANBP2P49792 3224 aaKnown RBP14.27□□□□□ -0.13
SDC2-201ENST00000302190 MYOCOSA0A1B0GUC4 107 aa14.27□□□□□ -0.13
SDC2-201ENST00000302190 ARHGEF37A1IGU5 675 aa14.27□□□□□ -0.13
SDC2-201ENST00000302190 WFS1O76024 890 aa14.27□□□□□ -0.13
SDC2-201ENST00000302190 BAIAP3O94812 1187 aa14.27□□□□□ -0.13
SDC2-201ENST00000302190 CNTFP26441 200 aa14.27□□□□□ -0.13
SDC2-201ENST00000302190 CCR1P32246 355 aa14.27□□□□□ -0.13
SDC2-201ENST00000302190 WASHC5Q12768 1159 aa14.27□□□□□ -0.13
SDC2-201ENST00000302190 KLF10Q13118 480 aa14.27□□□□□ -0.13
SDC2-201ENST00000302190 ZNF235Q14590 738 aa14.27□□□□□ -0.13
SDC2-201ENST00000302190 KCNJ11Q14654 390 aa14.27□□□□□ -0.13
SDC2-201ENST00000302190 DCAF4L1Q3SXM0 396 aa14.27□□□□□ -0.13
SDC2-201ENST00000302190 PITRM1Q5JRX3 1037 aa14.27□□□□□ -0.13
SDC2-201ENST00000302190 SPOUT1Q5T280 376 aaKnown RBP14.27□□□□□ -0.13
SDC2-201ENST00000302190 PSTKQ8IV42 348 aaKnown RBP14.27□□□□□ -0.13
SDC2-201ENST00000302190 DENND6AQ8IWF6 608 aa14.27□□□□□ -0.13
SDC2-201ENST00000302190 DNAJC1Q96KC8 554 aaKnown RBP14.27□□□□□ -0.13
SDC2-201ENST00000302190 SEPHS2Q99611 448 aa14.27□□□□□ -0.13
SDC2-201ENST00000302190 CPNE1Q99829 537 aa14.27□□□□□ -0.13
SDC2-201ENST00000302190 ADNPQ9H2P0 1102 aa14.27□□□□□ -0.13
SDC2-201ENST00000302190 LZTS1Q9Y250 596 aa14.27□□□□□ -0.13
SDC2-201ENST00000302190 SUPT3HB4E1H0 165 aa14.27□□□□□ -0.13
SDC2-201ENST00000302190 CNMDO75829 334 aa14.27□□□□□ -0.13
SDC2-201ENST00000302190 C4orf22Q6V702 233 aa14.27□□□□□ -0.13
SDC2-201ENST00000302190 DCBLD1Q8N8Z6 715 aa14.27□□□□□ -0.13
SDC2-201ENST00000302190 CXorf38Q8TB03 319 aa14.27□□□□□ -0.13
SDC2-201ENST00000302190 GPR152Q8TDT2 470 aa14.27□□□□□ -0.13
SDC2-201ENST00000302190 SENP8Q96LD8 212 aa14.27□□□□□ -0.13
SDC2-201ENST00000302190 GATA5Q9BWX5 397 aaPredicted RBP14.27□□□□□ -0.13
SDC2-201ENST00000302190 FZD8Q9H461 694 aa14.27□□□□□ -0.13
SDC2-201ENST00000302190 POMKQ9H5K3 350 aa14.27□□□□□ -0.13
SDC2-201ENST00000302190 HACD3Q9P035 362 aa14.27□□□□□ -0.13
SDC2-201ENST00000302190 CDH22Q9UJ99 828 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms