RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 OXSMQ9NWU1 459 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 SUCOQ9UBS9 1254 aaKnown RBP11.07□□□□□ -0.64
ZNF558-201ENST00000301475 A0A087WXM4 84 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 KPNA7A9QM74 516 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 TMEM233B4DJY2 109 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 SLC22A2O15244 555 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 E2F6O75461 281 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 TFE3P19532 575 aaPredicted RBP11.07□□□□□ -0.64
ZNF558-201ENST00000301475 CYP3A5P20815 502 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 ESRRGP62508 458 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 FSTL4Q6MZW2 842 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 TMEM26Q6ZUK4 368 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 VSIG10LQ86VR7 867 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 CNTD1Q8N815 330 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 CERS2Q96G23 380 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 NPLQ9BXD5 320 aaPredicted RBP11.07□□□□□ -0.64
ZNF558-201ENST00000301475 VPS33BQ9H267 617 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 CXorf21Q9HAI6 301 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 SLC38A10Q9HBR0 1119 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 SMOXQ9NWM0 555 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 CORINQ9Y5Q5 1042 aa11.07□□□□□ -0.64
ZNF558-201ENST00000301475 PRORSD1PA6NEY8 169 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 TIPRLO75663 272 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 NR3C2P08235 984 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 HDCP19113 662 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 GRIA4P48058 902 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 KCNC4Q03721 635 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 PMS2P3Q13401 168 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 GPR107Q5VW38 600 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 HEATR6Q6AI08 1181 aaKnown RBP11.06□□□□□ -0.64
ZNF558-201ENST00000301475 ZBTB49Q6ZSB9 765 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 DDHD1Q8NEL9 900 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 HMGCLL1Q8TB92 370 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 CHPT1Q8WUD6 406 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 GPRASP2Q96D09 838 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 UHRF1Q96T88 793 aaPredicted RBP11.06□□□□□ -0.64
ZNF558-201ENST00000301475 AGAP2Q99490 1192 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 DOK1Q99704 481 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 APBA2Q99767 749 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 CPNE1Q99829 537 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 BCO2Q9BYV7 579 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 DRC3Q9H069 523 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 NMRAL1Q9HBL8 299 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 GMPR2Q9P2T1 348 aaKnown RBP11.06□□□□□ -0.64
ZNF558-201ENST00000301475 MORF4L1Q9UBU8 362 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 CDYLQ9Y232 598 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 TCRBV3S1A0A5B6 114 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 GIPC1O14908 333 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 AKAP10O43572 662 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 C2P06681 752 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 KRT19P08727 400 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 SBK3P0C264 359 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 MLNP12872 115 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 GARSP41250 739 aaKnown RBP11.06□□□□□ -0.64
ZNF558-201ENST00000301475 BMXP51813 675 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 LIMK2P53671 638 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 ATXN1P54253 815 aaKnown RBP11.06□□□□□ -0.64
ZNF558-201ENST00000301475 OSTNP61366 133 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 FKBP1AP62942 108 aaKnown RBP11.06□□□□□ -0.64
ZNF558-201ENST00000301475 GRM1Q13255 1194 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 BAATQ14032 418 aaPredicted RBP11.06□□□□□ -0.64
ZNF558-201ENST00000301475 BOLA3Q53S33 107 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 C6orf10Q5SRN2 563 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 C4orf22Q6V702 233 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 STRA8Q7Z7C7 330 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 LSMEM2Q8N112 164 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 ADAMTS16Q8TE57 1224 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 SFMBT1Q9UHJ3 866 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 SIX4Q9UIU6 781 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 TRIM17Q9Y577 477 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 FADS3Q9Y5Q0 445 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 TNS1Q9HBL0 1735 aaKnown RBP11.06□□□□□ -0.64
ZNF558-201ENST00000301475 SAC3D1A6NKF1 404 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 SOBPA7XYQ1 873 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 TRIM24O15164 1050 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 MSCO60682 206 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 GSTT2P0CG29 244 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 GSTT2BP0CG30 244 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 MCF2P10911 925 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 ETFBP38117 255 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 RGS7P49802 495 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 RAB15P59190 212 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 RAB39AQ14964 217 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 CCDC92Q53HC0 331 aaPredicted RBP11.06□□□□□ -0.64
ZNF558-201ENST00000301475 GLRA4Q5JXX5 417 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 EPHX4Q8IUS5 362 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 ERLEC1Q96DZ1 483 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 SGF29Q96ES7 293 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 LGMNQ99538 433 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 MUC3BQ9H195 1237 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 TUBA8Q9NY65 449 aaPredicted RBP11.06□□□□□ -0.64
ZNF558-201ENST00000301475 DTLQ9NZJ0 730 aa11.06□□□□□ -0.64
ZNF558-201ENST00000301475 CPSF3Q9UKF6 684 aaKnown RBP11.06□□□□□ -0.64
ZNF558-201ENST00000301475 ZNF638Q14966 1978 aaKnown RBP11.06□□□□□ -0.64
ZNF558-201ENST00000301475 A0A0A0MRY4 1105 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 TRIM64A6NGJ6 449 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 ZNF839A8K0R7 811 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 SEC24DO94855 1032 aaPredicted RBP11.05□□□□□ -0.64
ZNF558-201ENST00000301475 CLIC3O95833 236 aa11.05□□□□□ -0.64
ZNF558-201ENST00000301475 YBX3P16989 372 aaKnown RBP eCLIP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms