RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 BTKQ06187 659 aa24.83■■□□□ 1.57
SPTSSA-201ENST00000298130 DBN1Q16643 649 aa24.83■■□□□ 1.57
SPTSSA-201ENST00000298130 RPS27LQ71UM5 84 aaKnown RBP24.83■■□□□ 1.57
SPTSSA-201ENST00000298130 SNX31Q8N9S9 440 aa24.83■■□□□ 1.57
SPTSSA-201ENST00000298130 RCN3Q96D15 328 aa24.83■■□□□ 1.57
SPTSSA-201ENST00000298130 SIK2Q9H0K1 926 aa24.83■■□□□ 1.57
SPTSSA-201ENST00000298130 CASS4Q9NQ75 786 aa24.83■■□□□ 1.57
SPTSSA-201ENST00000298130 GDAP2Q9NXN4 497 aa24.83■■□□□ 1.57
SPTSSA-201ENST00000298130 MYOCOSA0A1B0GUC4 107 aa24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 OR6B1O95007 311 aa24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 GABRB3P28472 473 aa24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 MAGEA12P43365 314 aa24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 NUMBP49757 651 aa24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 THOP1P52888 689 aa24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 CNPY1Q3B7I2 92 aa24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 SMYD5Q6GMV2 418 aa24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 CLEC14AQ86T13 490 aa24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 SH3GL3Q99963 347 aa24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 ILKAPQ9H0C8 392 aaPredicted RBP24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 IPPQ9Y573 584 aa24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 UQCRBP14927 111 aa24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 XRCC1P18887 633 aaPredicted RBP24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 NAB1Q13506 487 aa24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 FSCBQ5H9T9 825 aa24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 SDCCAG8Q86SQ7 713 aaPredicted RBP24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 SUDS3Q9H7L9 328 aaPredicted RBP24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 OXSMQ9NWU1 459 aa24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 YBX3P16989 372 aaKnown RBP eCLIP24.82■■□□□ 1.565e-6■■■□□ 17.7
SPTSSA-201ENST00000298130 SCNN1AP37088 669 aa24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 SATB1Q01826 763 aa24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 GK3PQ14409 553 aa24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 SNX17Q15036 470 aa24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 UBXN11Q5T124 520 aa24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 RWDD4Q6NW29 188 aaKnown RBP24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 SMOQ99835 787 aa24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 TKTL2Q9H0I9 626 aa24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 TLK1Q9UKI8 766 aa24.82■■□□□ 1.56
SPTSSA-201ENST00000298130 NRCAMQ92823 1304 aa24.81■■□□□ 1.56
SPTSSA-201ENST00000298130 PAN2Q504Q3 1202 aaKnown RBP24.81■■□□□ 1.56
SPTSSA-201ENST00000298130 KCTD11Q693B1 232 aa24.81■■□□□ 1.56
SPTSSA-201ENST00000298130 KBTBD6Q86V97 674 aa24.81■■□□□ 1.56
SPTSSA-201ENST00000298130 DSELQ8IZU8 1212 aa24.81■■□□□ 1.56
SPTSSA-201ENST00000298130 DFFAO00273 331 aa24.81■■□□□ 1.56
SPTSSA-201ENST00000298130 FAM200BP0CF97 657 aa24.81■■□□□ 1.56
SPTSSA-201ENST00000298130 CHRM1P11229 460 aaPredicted RBP24.81■■□□□ 1.56
SPTSSA-201ENST00000298130 TFEBP19484 476 aa24.81■■□□□ 1.56
SPTSSA-201ENST00000298130 GLDCP23378 1020 aa24.81■■□□□ 1.56
SPTSSA-201ENST00000298130 CDK7P50613 346 aa24.81■■□□□ 1.56
SPTSSA-201ENST00000298130 SV2CQ496J9 727 aa24.81■■□□□ 1.56
SPTSSA-201ENST00000298130 PTAR1Q7Z6K3 402 aaPredicted RBP24.81■■□□□ 1.56
SPTSSA-201ENST00000298130 TMEM151AQ8N4L1 468 aa24.81■■□□□ 1.56
SPTSSA-201ENST00000298130 TRAPPC9Q96Q05 1148 aa24.81■■□□□ 1.56
SPTSSA-201ENST00000298130 OR12D3Q9UGF7 316 aa24.81■■□□□ 1.56
SPTSSA-201ENST00000298130 NEMP2A6NFY4 417 aa24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 AHSGP02765 367 aa24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 DPP6P42658 865 aa24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 MS4A2Q01362 244 aa24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 ROR2Q01974 943 aaKnown RBP24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 PPIDQ08752 370 aaKnown RBP24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 DUSP28Q4G0W2 176 aa24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 TWF2Q6IBS0 349 aaKnown RBP24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 ACAD11Q709F0 780 aa24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 SATL1Q86VE3 508 aa24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 CNTD1Q8N815 330 aa24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 SMG8Q8ND04 991 aaKnown RBP24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 ZMIZ2Q8NF64 920 aa24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 ZNF419Q96HQ0 510 aaPredicted RBP24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 SLC2A13Q96QE2 648 aa24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 SLC2A6Q9UGQ3 507 aa24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 LRIG2O94898 1065 aa24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 INHBEP58166 350 aa24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 FOLH1Q04609 750 aa24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 PDK3Q15120 406 aa24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 LIN52Q52LA3 116 aa24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 SEL1L3Q68CR1 1132 aa24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 TMC7Q7Z402 723 aa24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 CEP97Q8IW35 865 aa24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 FSTL5Q8N475 847 aaPredicted RBP24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 IPMKQ8NFU5 416 aa24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 RNF34Q969K3 372 aa24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 PCED1BQ96HM7 432 aa24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 NPAS2Q99743 824 aa24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 GBA3Q9H227 469 aa24.8■■□□□ 1.56
SPTSSA-201ENST00000298130 PDHXO00330 501 aa24.79■■□□□ 1.56
SPTSSA-201ENST00000298130 MATN2O00339 956 aa24.79■■□□□ 1.56
SPTSSA-201ENST00000298130 PTGESO14684 152 aa24.79■■□□□ 1.56
SPTSSA-201ENST00000298130 GRID2O43424 1007 aa24.79■■□□□ 1.56
SPTSSA-201ENST00000298130 VAPBO95292 243 aa24.79■■□□□ 1.56
SPTSSA-201ENST00000298130 MYL4P12829 197 aa24.79■■□□□ 1.56
SPTSSA-201ENST00000298130 ALDH1A3P47895 512 aa24.79■■□□□ 1.56
SPTSSA-201ENST00000298130 IL31Q6EBC2 164 aa24.79■■□□□ 1.56
SPTSSA-201ENST00000298130 BNIPLQ7Z465 357 aa24.79■■□□□ 1.56
SPTSSA-201ENST00000298130 MFSD6LQ8IWD5 586 aa24.79■■□□□ 1.56
SPTSSA-201ENST00000298130 TMA16Q96EY4 203 aaKnown RBP24.79■■□□□ 1.56
SPTSSA-201ENST00000298130 RTKNQ9BST9 563 aa24.79■■□□□ 1.56
SPTSSA-201ENST00000298130 COPS7BQ9H9Q2 264 aaPredicted RBP24.79■■□□□ 1.56
SPTSSA-201ENST00000298130 XPR1Q9UBH6 696 aa24.79■■□□□ 1.56
SPTSSA-201ENST00000298130 MPOP05164 745 aa24.79■■□□□ 1.56
SPTSSA-201ENST00000298130 RPL14P50914 215 aaKnown RBP24.79■■□□□ 1.56
SPTSSA-201ENST00000298130 DAOAP59103 153 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms