RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 STRA8Q7Z7C7 330 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 APLFQ8IW19 511 aaPredicted RBP13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 SH3KBP1Q96B97 665 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 MAELQ96JY0 434 aaKnown RBP13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 THAP1Q9NVV9 213 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 KLHL8Q9P2G9 620 aaPredicted RBP13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 NUDT5Q9UKK9 219 aa13.53□□□□□ -0.24
KCNIP3-201ENST00000295225 KCNJ13O60928 360 aa13.52□□□□□ -0.24
KCNIP3-201ENST00000295225 OR6B1O95007 311 aa13.52□□□□□ -0.24
KCNIP3-201ENST00000295225 HNRNPCP07910 306 aaKnown RBP eCLIP13.52□□□□□ -0.24
KCNIP3-201ENST00000295225 CENPAP49450 140 aa13.52□□□□□ -0.24
KCNIP3-201ENST00000295225 HIC1Q14526 733 aa13.52□□□□□ -0.24
KCNIP3-201ENST00000295225 CDKL3Q8IVW4 592 aaPredicted RBP13.52□□□□□ -0.24
KCNIP3-201ENST00000295225 GPC2Q8N158 579 aa13.52□□□□□ -0.24
KCNIP3-201ENST00000295225 SLC4A5Q9BY07 1137 aa13.52□□□□□ -0.24
KCNIP3-201ENST00000295225 COG4Q9H9E3 785 aa13.52□□□□□ -0.24
KCNIP3-201ENST00000295225 PREBQ9HCU5 417 aa13.52□□□□□ -0.24
KCNIP3-201ENST00000295225 SNX15Q9NRS6 342 aa13.52□□□□□ -0.24
KCNIP3-201ENST00000295225 PIGVQ9NUD9 493 aa13.52□□□□□ -0.24
KCNIP3-201ENST00000295225 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.52□□□□□ -0.25
KCNIP3-201ENST00000295225 M0QX08 132 aa13.52□□□□□ -0.25
KCNIP3-201ENST00000295225 NRP1O14786 923 aa13.52□□□□□ -0.25
KCNIP3-201ENST00000295225 PGM3O95394 542 aa13.52□□□□□ -0.25
KCNIP3-201ENST00000295225 RALBP11234 206 aa13.52□□□□□ -0.25
KCNIP3-201ENST00000295225 HDCP19113 662 aa13.52□□□□□ -0.25
KCNIP3-201ENST00000295225 MPSTP25325 297 aa13.52□□□□□ -0.25
KCNIP3-201ENST00000295225 ACTR3P61158 418 aa13.52□□□□□ -0.25
KCNIP3-201ENST00000295225 MRPS35P82673 323 aaKnown RBP13.52□□□□□ -0.25
KCNIP3-201ENST00000295225 CRY1Q16526 586 aa13.52□□□□□ -0.25
KCNIP3-201ENST00000295225 TRIML2Q8N7C3 387 aa13.52□□□□□ -0.25
KCNIP3-201ENST00000295225 SLC7A14Q8TBB6 771 aa13.52□□□□□ -0.25
KCNIP3-201ENST00000295225 PPP4R1Q8TF05 950 aa13.52□□□□□ -0.25
KCNIP3-201ENST00000295225 KBTBD7Q8WVZ9 684 aa13.52□□□□□ -0.25
KCNIP3-201ENST00000295225 OPTNQ96CV9 577 aa13.52□□□□□ -0.25
KCNIP3-201ENST00000295225 GCNAQ96QF7 691 aa13.52□□□□□ -0.25
KCNIP3-201ENST00000295225 ASB7Q9H672 318 aa13.52□□□□□ -0.25
KCNIP3-201ENST00000295225 PNPLA8Q9NP80 782 aa13.52□□□□□ -0.25
KCNIP3-201ENST00000295225 A0A1W2PRQ8 180 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 TRIM43BA6NCK2 446 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 MUSKO15146 869 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 OPHN1O60890 802 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 LYNP07948 512 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 ARL4AP40617 200 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 MAGEA3P43357 314 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 CXCR3P49682 368 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 TRIP10Q15642 601 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 NXNQ6DKJ4 435 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 NPWQ8N729 165 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 PAWRQ96IZ0 340 aaKnown RBP13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 ZNF670Q9BS34 389 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 FRMD8P1Q9BZ68 369 aaPredicted RBP13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 NUF2Q9BZD4 464 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 CYP3A43Q9HB55 503 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 TMEM30AQ9NV96 361 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 FKBP14Q9NWM8 211 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 SOX13Q9UN79 622 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 PIN4Q9Y237 131 aaKnown RBP13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 HTR3EA5X5Y0 456 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 SERPINA6P08185 405 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 COL6A1P12109 1028 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 NELFEP18615 380 aaKnown RBP13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 CCNFP41002 786 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 POLD2P49005 469 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 CCNIQ14094 377 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 GRIK4Q16099 956 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 DPYSL2Q16555 572 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 GRAMD1BQ3KR37 738 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 SH3D19Q5HYK7 790 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 RABGAP1LQ5R372 815 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 FSTL4Q6MZW2 842 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 GPRIN1Q7Z2K8 1008 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 SPATA22Q8NHS9 363 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 RNF139Q8WU17 664 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 ABHD8Q96I13 439 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 ECSITQ9BQ95 431 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 C16orf70Q9BSU1 422 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 FAM117AQ9C073 453 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 IARS2Q9NSE4 1012 aaKnown RBP13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 RNF181Q9P0P0 153 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 ITGA11Q9UKX5 1188 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 SLC39A10Q9ULF5 831 aa13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 MTF2Q9Y483 593 aaPredicted RBP13.51□□□□□ -0.25
KCNIP3-201ENST00000295225 A0A0A0MRY4 1105 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 TRDMT1O14717 391 aaKnown RBP13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 ZBTB24O43167 697 aaPredicted RBP13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 GCATO75600 419 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 PAHP00439 452 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 LMNAP02545 664 aaKnown RBP13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 SPATA31D3P0C874 917 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 SRGAP2BP0DMP2 458 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 RAG1P15918 1043 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 HSD17B7P56937 341 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 ACAP1Q15027 740 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 ARHGAP36Q6ZRI8 547 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 SPATA31D4Q6ZUB0 917 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 OTOP3Q7RTS5 596 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 ARRDC4Q8NCT1 418 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 SPATA13Q96N96 652 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 QKIQ96PU8 341 aaKnown RBP eCLIP13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 LENG8Q96PV6 779 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms