RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 NAA50Q9GZZ1 169 aaKnown RBP10.44□□□□□ -0.74
LMX1A-201ENST00000294816 DEFB129Q9H1M3 183 aa10.44□□□□□ -0.74
LMX1A-201ENST00000294816 ZBTB26Q9HCK0 441 aa10.44□□□□□ -0.74
LMX1A-201ENST00000294816 VPS45Q9NRW7 570 aa10.44□□□□□ -0.74
LMX1A-201ENST00000294816 IARS2Q9NSE4 1012 aaKnown RBP10.44□□□□□ -0.74
LMX1A-201ENST00000294816 SLC38A7Q9NVC3 462 aa10.44□□□□□ -0.74
LMX1A-201ENST00000294816 AP4E1Q9UPM8 1137 aa10.44□□□□□ -0.74
LMX1A-201ENST00000294816 TRIM17Q9Y577 477 aa10.44□□□□□ -0.74
LMX1A-201ENST00000294816 A0A0A0MRY4 1105 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 C1orf232A0A0U1RR37 186 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 GRID2O43424 1007 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 SERPINB7O75635 380 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 CD247P20963 164 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 CDH3P22223 829 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 EEF1B2P24534 225 aaKnown RBP10.43□□□□□ -0.74
LMX1A-201ENST00000294816 MAP4P27816 1152 aaKnown RBP10.43□□□□□ -0.74
LMX1A-201ENST00000294816 ARL2P36404 184 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 GRIA3P42263 894 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 BCAP31P51572 246 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 CTBSQ01459 385 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 PRKAA1Q13131 559 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 PRPSAP1Q14558 356 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 NR1D2Q14995 579 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 STEAP4Q687X5 459 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 TMEM53Q6P2H8 277 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 C4orf22Q6V702 233 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 CHSY3Q70JA7 882 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 TRIM50Q86XT4 487 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 CBR4Q8N4T8 237 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 ARNTL2Q8WYA1 636 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 SPATA13Q96N96 652 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 RBBP8Q99708 897 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 SLC39A3Q9BRY0 314 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 UPF3AQ9H1J1 476 aaKnown RBP10.43□□□□□ -0.74
LMX1A-201ENST00000294816 RPF1Q9H9Y2 349 aaKnown RBP10.43□□□□□ -0.74
LMX1A-201ENST00000294816 MTMR10Q9NXD2 777 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 RUVBL2Q9Y230 463 aaKnown RBP10.43□□□□□ -0.74
LMX1A-201ENST00000294816 TCAF2A6NFQ2 919 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 KCNK1O00180 336 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 GPC4O75487 556 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 RGS20O76081 388 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 ALDH1A2O94788 518 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 GOT1P17174 413 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 YAP1P46937 504 aaKnown RBP10.43□□□□□ -0.74
LMX1A-201ENST00000294816 NDST1P52848 882 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 GNA12Q03113 381 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 USP10Q14694 798 aaKnown RBP10.43□□□□□ -0.74
LMX1A-201ENST00000294816 SURF1Q15526 300 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 KIZQ2M2Z5 673 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 IL31Q6EBC2 164 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 SNRNP48Q6IEG0 339 aaKnown RBP10.43□□□□□ -0.74
LMX1A-201ENST00000294816 DCDC5Q6ZRR9 648 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 ZBTB8OSQ8IWT0 167 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 NSUN6Q8TEA1 469 aaKnown RBP10.43□□□□□ -0.74
LMX1A-201ENST00000294816 KCTD4Q8WVF5 259 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 ASB9Q96DX5 294 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 CNDP1Q96KN2 507 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 HIPK3Q9H422 1215 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 DTLQ9NZJ0 730 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 KLHL8Q9P2G9 620 aaPredicted RBP10.43□□□□□ -0.74
LMX1A-201ENST00000294816 SLX4Q8IY92 1834 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 C9IYK1 514 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 WDR46O15213 610 aaKnown RBP10.43□□□□□ -0.74
LMX1A-201ENST00000294816 B4GALT5O43286 388 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 GJB1P08034 283 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 TPH1P17752 444 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 HOXD12P35452 270 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 LDLRAP1Q5SW96 308 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 EEF1DP3Q658K8 133 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 MAP1SQ66K74 1059 aaPredicted RBP10.43□□□□□ -0.74
LMX1A-201ENST00000294816 C7orf31Q8N865 590 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.43□□□□□ -0.74
LMX1A-201ENST00000294816 HM13Q8TCT9 377 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 MFSD3Q96ES6 412 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 QKIQ96PU8 341 aaKnown RBP eCLIP10.43□□□□□ -0.74
LMX1A-201ENST00000294816 ZNF670Q9BS34 389 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 RPAP3Q9H6T3 665 aaPredicted RBP10.43□□□□□ -0.74
LMX1A-201ENST00000294816 OXSMQ9NWU1 459 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 MORF4L1Q9UBU8 362 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 RBMX2Q9Y388 322 aaKnown RBP10.43□□□□□ -0.74
LMX1A-201ENST00000294816 SNX9Q9Y5X1 595 aa10.43□□□□□ -0.74
LMX1A-201ENST00000294816 TMEM247A6NEH6 219 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 NRP1O14786 923 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 ADAM23O75077 832 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 BMP10O95393 424 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 VDRP11473 427 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 HNRNPLP14866 589 aaKnown RBP eCLIP10.42□□□□□ -0.74
LMX1A-201ENST00000294816 ARL4AP40617 200 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 LIMK2P53671 638 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 NME5P56597 212 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 TUBA4AP68366 448 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 RHDQ02161 417 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 ITGA7Q13683 1181 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 VPS72Q15906 364 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 TREML2Q5T2D2 321 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 LIPMQ5VYY2 423 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 SIX6OS1Q8N1H7 587 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 CANT1Q8WVQ1 401 aa10.42□□□□□ -0.74
LMX1A-201ENST00000294816 PPP1R10Q96QC0 940 aaKnown RBP10.42□□□□□ -0.74
LMX1A-201ENST00000294816 ZNHIT2Q9UHR6 403 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms