RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 GPR15P49685 360 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 KCNK10P57789 538 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 MAP2K5Q13163 448 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 PTK2BQ14289 1009 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 KCNA10Q16322 511 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 PDK4Q16654 411 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 C16orf87Q6PH81 154 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 IGDCC3Q8IVU1 814 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 DENND6AQ8IWF6 608 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 GDPD5Q8WTR4 605 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 ZNF333Q96JL9 665 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 FCRL2Q96LA5 508 aaPredicted RBP4.86□□□□□ -1.63
UBR1-201ENST00000290650 PCYT2Q99447 389 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 DDX18Q9NVP1 670 aaKnown RBP4.86□□□□□ -1.63
UBR1-201ENST00000290650 NCKIPSDQ9NZQ3 722 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 EGFL7Q9UHF1 273 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 KIAA1217Q5T5P2 1943 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 ATRNL1Q5VV63 1379 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 NPM3O75607 178 aaKnown RBP4.86□□□□□ -1.63
UBR1-201ENST00000290650 CYP1A1P04798 512 aaPredicted RBP4.86□□□□□ -1.63
UBR1-201ENST00000290650 LINC00032P0C843 101 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 PCNAP12004 261 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 ZNF23P17027 643 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 NMBRP28336 390 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 RANBP1P43487 201 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 RFX3P48380 749 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 BNC2Q6ZN30 1099 aaPredicted RBP4.86□□□□□ -1.63
UBR1-201ENST00000290650 RBM23Q86U06 439 aaKnown RBP4.86□□□□□ -1.63
UBR1-201ENST00000290650 BHLHE22Q8NFJ8 381 aaPredicted RBP4.86□□□□□ -1.63
UBR1-201ENST00000290650 TRPC4APQ8TEL6 797 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 HDAC10Q969S8 669 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 PEBP4Q96S96 227 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 EBNA1BP2Q99848 306 aaKnown RBP4.86□□□□□ -1.63
UBR1-201ENST00000290650 ECSITQ9BQ95 431 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 COLEC11Q9BWP8 271 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 DUSP16Q9BY84 665 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 NIFKQ9BYG3 293 aaKnown RBP4.86□□□□□ -1.63
UBR1-201ENST00000290650 ZNF112Q9UJU3 913 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 ZNF711Q9Y462 761 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 OR51F1A6NGY5 319 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 F8W8V4 182 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 INPP4BO15327 924 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 PEX11AO75192 247 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 CYBBP04839 570 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 LILRA4P59901 499 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 NFYCQ13952 458 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 FASTKQ14296 549 aaKnown RBP4.86□□□□□ -1.63
UBR1-201ENST00000290650 SKIV2LQ15477 1246 aaKnown RBP4.86□□□□□ -1.63
UBR1-201ENST00000290650 GRTP1Q5TC63 336 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 LPCAT4Q643R3 524 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 CLEC6AQ6EIG7 209 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 C12orf56Q8IXR9 622 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 C2orf73Q8N5S3 287 aaPredicted RBP4.86□□□□□ -1.63
UBR1-201ENST00000290650 LMO3Q8TAP4 145 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 NPLOC4Q8TAT6 608 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 SNRNP27Q8WVK2 155 aaKnown RBP4.86□□□□□ -1.63
UBR1-201ENST00000290650 BORCS6Q96GS4 357 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 CPNE1Q99829 537 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 CCT7Q99832 543 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 SEMA3CQ99985 751 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 GMIPQ9P107 970 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 MCM8Q9UJA3 840 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 LSM7Q9UK45 103 aaKnown RBP4.86□□□□□ -1.63
UBR1-201ENST00000290650 PADI3Q9ULW8 664 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 CHKBQ9Y259 395 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 PCDHB5Q9Y5E4 795 aa4.86□□□□□ -1.63
UBR1-201ENST00000290650 IQCF5A8MTL0 148 aa4.85□□□□□ -1.63
UBR1-201ENST00000290650 TK2O00142 265 aa4.85□□□□□ -1.63
UBR1-201ENST00000290650 UNC5CO95185 931 aa4.85□□□□□ -1.63
UBR1-201ENST00000290650 SERPINE1P05121 402 aa4.85□□□□□ -1.63
UBR1-201ENST00000290650 EDN1P05305 212 aa4.85□□□□□ -1.63
UBR1-201ENST00000290650 IQCF3P0C7M6 154 aa4.85□□□□□ -1.63
UBR1-201ENST00000290650 DARSP14868 501 aaKnown RBP4.85□□□□□ -1.63
UBR1-201ENST00000290650 ABCE1P61221 599 aaKnown RBP4.85□□□□□ -1.63
UBR1-201ENST00000290650 PITX1P78337 314 aaPredicted RBP4.85□□□□□ -1.63
UBR1-201ENST00000290650 NR6A1Q15406 480 aa4.85□□□□□ -1.63
UBR1-201ENST00000290650 RNASEH2BQ5TBB1 312 aaKnown RBP4.85□□□□□ -1.63
UBR1-201ENST00000290650 SAPCD2Q86UD0 394 aa4.85□□□□□ -1.63
UBR1-201ENST00000290650 FNDC5Q8NAU1 212 aa4.85□□□□□ -1.63
UBR1-201ENST00000290650 DNAJB14Q8TBM8 379 aa4.85□□□□□ -1.63
UBR1-201ENST00000290650 TRIM62Q9BVG3 475 aa4.85□□□□□ -1.63
UBR1-201ENST00000290650 ZFP14Q9HCL3 533 aa4.85□□□□□ -1.63
UBR1-201ENST00000290650 KIAA0100Q14667 2235 aaKnown RBP4.85□□□□□ -1.63
UBR1-201ENST00000290650 A0A0G2JLL6 359 aaPredicted RBP4.85□□□□□ -1.63
UBR1-201ENST00000290650 SCAMP1O15126 338 aa4.85□□□□□ -1.63
UBR1-201ENST00000290650 ATP6V1B2P21281 511 aa4.85□□□□□ -1.63
UBR1-201ENST00000290650 ARHGDIAP52565 204 aa4.85□□□□□ -1.63
UBR1-201ENST00000290650 UBE3AQ05086 875 aa4.85□□□□□ -1.63
UBR1-201ENST00000290650 GTF2H3Q13889 308 aa4.85□□□□□ -1.63
UBR1-201ENST00000290650 TARBP2Q15633 366 aaKnown RBP4.85□□□□□ -1.63
UBR1-201ENST00000290650 MAPRE1Q15691 268 aaKnown RBP4.85□□□□□ -1.63
UBR1-201ENST00000290650 MRNIPQ6NTE8 343 aa4.85□□□□□ -1.63
UBR1-201ENST00000290650 PRRT2Q7Z6L0 340 aaPredicted RBP4.85□□□□□ -1.63
UBR1-201ENST00000290650 ZNF598Q86UK7 904 aaKnown RBP4.85□□□□□ -1.63
UBR1-201ENST00000290650 ZNF567Q8N184 647 aa4.85□□□□□ -1.63
UBR1-201ENST00000290650 CALML6Q8TD86 181 aa4.85□□□□□ -1.63
UBR1-201ENST00000290650 FIG4Q92562 907 aa4.85□□□□□ -1.63
UBR1-201ENST00000290650 TEPSINQ96N21 525 aa4.85□□□□□ -1.63
UBR1-201ENST00000290650 EBF4Q9BQW3 602 aa4.85□□□□□ -1.63
UBR1-201ENST00000290650 DCLRE1BQ9H816 532 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms