RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 GPR32O75388 356 aa13.17□□□□□ -0.3
C9orf3-201ENST00000277198 USP1O94782 785 aa13.17□□□□□ -0.3
C9orf3-201ENST00000277198 PARNO95453 639 aaKnown RBP13.17□□□□□ -0.3
C9orf3-201ENST00000277198 CPA3P15088 417 aa13.17□□□□□ -0.3
C9orf3-201ENST00000277198 KCNA4P22459 653 aa13.17□□□□□ -0.3
C9orf3-201ENST00000277198 WARSP23381 471 aaKnown RBP13.17□□□□□ -0.3
C9orf3-201ENST00000277198 ACAT1P24752 427 aaKnown RBP13.17□□□□□ -0.3
C9orf3-201ENST00000277198 LIMK2P53671 638 aa13.17□□□□□ -0.3
C9orf3-201ENST00000277198 C16orf46Q6P387 395 aa13.17□□□□□ -0.3
C9orf3-201ENST00000277198 PIGZQ86VD9 579 aa13.17□□□□□ -0.3
C9orf3-201ENST00000277198 LCA5Q86VQ0 697 aa13.17□□□□□ -0.3
C9orf3-201ENST00000277198 C10orf107Q8IVU9 208 aa13.17□□□□□ -0.3
C9orf3-201ENST00000277198 ZNF567Q8N184 647 aa13.17□□□□□ -0.3
C9orf3-201ENST00000277198 PYROXD2Q8N2H3 581 aa13.17□□□□□ -0.3
C9orf3-201ENST00000277198 TOP6BLQ8N6T0 577 aa13.17□□□□□ -0.3
C9orf3-201ENST00000277198 LINC01599Q8WXQ3 324 aa13.17□□□□□ -0.3
C9orf3-201ENST00000277198 C18orf25Q96B23 403 aaPredicted RBP13.17□□□□□ -0.3
C9orf3-201ENST00000277198 PGBD4Q96DM1 585 aa13.17□□□□□ -0.3
C9orf3-201ENST00000277198 SLC2A13Q96QE2 648 aa13.17□□□□□ -0.3
C9orf3-201ENST00000277198 RBBP8Q99708 897 aa13.17□□□□□ -0.3
C9orf3-201ENST00000277198 FAM192AQ9GZU8 254 aa13.17□□□□□ -0.3
C9orf3-201ENST00000277198 PRDM12Q9H4Q4 367 aa13.17□□□□□ -0.3
C9orf3-201ENST00000277198 SYBUQ9NX95 663 aa13.17□□□□□ -0.3
C9orf3-201ENST00000277198 ZDHHC7Q9NXF8 308 aa13.17□□□□□ -0.3
C9orf3-201ENST00000277198 BFARQ9NZS9 450 aa13.17□□□□□ -0.3
C9orf3-201ENST00000277198 DLGAP2Q9P1A6 1054 aa13.17□□□□□ -0.3
C9orf3-201ENST00000277198 WASF2Q9Y6W5 498 aa13.17□□□□□ -0.3
C9orf3-201ENST00000277198 RALGAPA2Q2PPJ7 1873 aa13.17□□□□□ -0.3
C9orf3-201ENST00000277198 ABHD14A-ACY1A0A1B0GW23 586 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 DCLK1O15075 740 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 RECQL4O94761 1208 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 AP2A1O95782 977 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 APOA4P06727 396 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 PDGFRBP09619 1106 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 DNAJB1P25685 340 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 LMO2P25791 158 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 PSMB4P28070 264 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 PSEN1P49768 467 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 CCNHP51946 323 aaPredicted RBP13.16□□□□□ -0.3
C9orf3-201ENST00000277198 PRKAA2P54646 552 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 RPL26P61254 145 aaKnown RBP13.16□□□□□ -0.3
C9orf3-201ENST00000277198 IRX4P78413 519 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 SCAPQ12770 1279 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 HNRNPDQ14103 355 aaKnown RBP13.16□□□□□ -0.3
C9orf3-201ENST00000277198 ADGRE1Q14246 886 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 RAB30Q15771 203 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 KIZQ2M2Z5 673 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 PPP2R2DQ66LE6 453 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 RFX8Q6ZV50 586 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 UNC5BQ8IZJ1 945 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 CCNYQ8ND76 341 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 SEPT8Q92599 483 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 IFT43Q96FT9 208 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 VAT1Q99536 393 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 EIF2AQ9BY44 585 aaKnown RBP13.16□□□□□ -0.3
C9orf3-201ENST00000277198 MAGEB5Q9BZ81 275 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 S100A14Q9HCY8 104 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 TMEM216Q9P0N5 145 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 TRHDEQ9UKU6 1024 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 TRPV2Q9Y5S1 764 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 PSAT1Q9Y617 370 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 CITO14578 2027 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 MICAL3Q7RTP6 2002 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 SMIM28A0A1B0GU29 152 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 TIMM44O43615 452 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 HUS1O60921 280 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 LYPLA1O75608 230 aaPredicted RBP13.16□□□□□ -0.3
C9orf3-201ENST00000277198 FBXO21O94952 628 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 UPP2O95045 317 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 TOP3BO95985 862 aaKnown RBP13.16□□□□□ -0.3
C9orf3-201ENST00000277198 DARSP14868 501 aaKnown RBP13.16□□□□□ -0.3
C9orf3-201ENST00000277198 NPR3P17342 541 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 CSE1LP55060 971 aaKnown RBP13.16□□□□□ -0.3
C9orf3-201ENST00000277198 CRADDP78560 199 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 DCAF6Q58WW2 860 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 MDH1BQ5I0G3 518 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 FAM182AQ5T1J6 154 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 PID1Q7Z2X4 250 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 RSPH3Q86UC2 560 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.16□□□□□ -0.3
C9orf3-201ENST00000277198 B3GALNT2Q8NCR0 500 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 UCMAQ8WVF2 138 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 PPP2R3CQ969Q6 453 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 FAM149B1Q96BN6 582 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 ECSITQ9BQ95 431 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 CXCL16Q9H2A7 254 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 CASS4Q9NQ75 786 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 SNX15Q9NRS6 342 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 MFHAS1Q9Y4C4 1052 aa13.16□□□□□ -0.3
C9orf3-201ENST00000277198 C9IYK1 514 aa13.15□□□□□ -0.3
C9orf3-201ENST00000277198 EEF2KO00418 725 aaKnown RBP13.15□□□□□ -0.3
C9orf3-201ENST00000277198 SLC22A2O15244 555 aa13.15□□□□□ -0.3
C9orf3-201ENST00000277198 TLL1O43897 1013 aa13.15□□□□□ -0.3
C9orf3-201ENST00000277198 GJB5O95377 273 aa13.15□□□□□ -0.3
C9orf3-201ENST00000277198 NPY2RP49146 381 aa13.15□□□□□ -0.3
C9orf3-201ENST00000277198 ADIGQ0VDE8 80 aa13.15□□□□□ -0.3
C9orf3-201ENST00000277198 OTUD1Q5VV17 481 aaPredicted RBP13.15□□□□□ -0.3
C9orf3-201ENST00000277198 PDPK2PQ6A1A2 396 aa13.15□□□□□ -0.3
C9orf3-201ENST00000277198 EPGNQ6UW88 154 aa13.15□□□□□ -0.3
C9orf3-201ENST00000277198 MAVSQ7Z434 540 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms