RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 SIX6OS1Q8N1H7 587 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 SNX31Q8N9S9 440 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 TAS1R2Q8TE23 839 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 RMDN3Q96TC7 470 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 ATP13A3Q9H7F0 1226 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 NUDT5Q9UKK9 219 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 SLC30A1Q9Y6M5 507 aa8.93□□□□□ -0.98
VAPB-201ENST00000265619 hCG_1818297A0A087WSY0 165 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 PSTPIP1O43586 416 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 SNRPAP09012 282 aaKnown RBP8.92□□□□□ -0.98
VAPB-201ENST00000265619 PTPRAP18433 802 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 MAGP20916 626 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 VGLL4Q14135 290 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 FXNQ16595 210 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 NAPRTQ6XQN6 538 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 ILDR2Q71H61 639 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 MON1BQ7L1V2 547 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 SLC22A16Q86VW1 577 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 EPHX4Q8IUS5 362 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 GPC2Q8N158 579 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 SLC35B2Q8TB61 432 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 TRPC4APQ8TEL6 797 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 SNX19Q92543 992 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 HTRA1Q92743 480 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 EIF2AK1Q9BQI3 630 aaKnown RBP8.92□□□□□ -0.98
VAPB-201ENST00000265619 C17orf80Q9BSJ5 609 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 ZBED2Q9BTP6 218 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 COL20A1Q9P218 1284 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 SLCO3A1Q9UIG8 710 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 FEM1BQ9UK73 627 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 B3GNT3Q9Y2A9 372 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 TTC34A8MYJ7 566 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 SPAG6O75602 509 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 HDCP19113 662 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 CCNA2P20248 432 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 ACAT1P24752 427 aaKnown RBP8.92□□□□□ -0.98
VAPB-201ENST00000265619 ACADSBP45954 432 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 POLD2P49005 469 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 APLP1P51693 650 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 COPZ1P61923 177 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 PTP4A2Q12974 167 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 BFSP2Q13515 415 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 PPM1JQ5JR12 505 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 ODR4Q5SWX8 454 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.92□□□□□ -0.98
VAPB-201ENST00000265619 N4BP2L1Q5TBK1 243 aaPredicted RBP8.92□□□□□ -0.98
VAPB-201ENST00000265619 USP37Q86T82 979 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 ANKRD13BQ86YJ7 626 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 APOBEC3FQ8IUX4 373 aaKnown RBP8.92□□□□□ -0.98
VAPB-201ENST00000265619 FAM178BQ8IXR5 827 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 LGI2Q8N0V4 545 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 TTC39CQ8N584 583 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 ESX1Q8N693 406 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 PCDH20Q8N6Y1 951 aaKnown RBP8.92□□□□□ -0.98
VAPB-201ENST00000265619 SLC39A3Q9BRY0 314 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 CNGB3Q9NQW8 809 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 TCAF1Q9Y4C2 921 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 AP4S1Q9Y587 144 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 TLR3O15455 904 aaKnown RBP8.92□□□□□ -0.98
VAPB-201ENST00000265619 XYLBO75191 536 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 ALDH1A2O94788 518 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 BCL10O95999 233 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 JUNP05412 331 aaKnown RBP8.92□□□□□ -0.98
VAPB-201ENST00000265619 ITGAVP06756 1048 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 IST1P53990 364 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 PHC1P78364 1004 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 PRKCQQ04759 706 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 PLCL1Q15111 1095 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 DLG2Q15700 870 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 SUPT20HL1Q3ZLR7 823 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 TRAF7Q6Q0C0 670 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 CYP4V2Q6ZWL3 525 aaPredicted RBP8.92□□□□□ -0.98
VAPB-201ENST00000265619 CBWD2Q8IUF1 395 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 TMEM126BQ8IUX1 230 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 HERC6Q8IVU3 1022 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 PDIK1LQ8N165 341 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 CDK5RAP1Q96SZ6 601 aaKnown RBP8.92□□□□□ -0.98
VAPB-201ENST00000265619 WDR18Q9BV38 432 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 EMILIN2Q9BXX0 1053 aa8.92□□□□□ -0.98
VAPB-201ENST00000265619 C9IYK1 514 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 hCG_1984214I3L0E3 225 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 AP3B1O00203 1094 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 EIF3DO15371 548 aaKnown RBP eCLIP8.91□□□□□ -0.98
VAPB-201ENST00000265619 GCATO75600 419 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 ATICP31939 592 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 CDKN2BP42772 138 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 PRKAA2P54646 552 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 BACE1P56817 501 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 ZNF280AP59817 542 aaPredicted RBP8.91□□□□□ -0.98
VAPB-201ENST00000265619 CDK18Q07002 472 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 PTK2BQ14289 1009 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 SNAP47Q5SQN1 464 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 ZFP1Q6P2D0 407 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 TTC23LQ6PF05 361 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 CYP2U1Q7Z449 544 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 HEATR4Q86WZ0 1026 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 DAW1Q8N136 415 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 MPP5Q8N3R9 675 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 KYQ8NBH2 561 aa8.91□□□□□ -0.98
VAPB-201ENST00000265619 TP53I13Q8NBR0 393 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms