RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 STRA8Q7Z7C7 330 aa15.23■□□□□ 0.03
XRCC1-201ENST00000262887 HERC6Q8IVU3 1022 aa15.23■□□□□ 0.03
XRCC1-201ENST00000262887 NSUN6Q8TEA1 469 aaKnown RBP15.23■□□□□ 0.03
XRCC1-201ENST00000262887 HTR3CQ8WXA8 447 aa15.23■□□□□ 0.03
XRCC1-201ENST00000262887 SPATA13Q96N96 652 aa15.23■□□□□ 0.03
XRCC1-201ENST00000262887 PPP1R10Q96QC0 940 aaKnown RBP15.23■□□□□ 0.03
XRCC1-201ENST00000262887 GPATCH1Q9BRR8 931 aaKnown RBP15.23■□□□□ 0.03
XRCC1-201ENST00000262887 PCDHAC1Q9H158 963 aa15.23■□□□□ 0.03
XRCC1-201ENST00000262887 RPF2Q9H7B2 306 aaKnown RBP15.23■□□□□ 0.03
XRCC1-201ENST00000262887 ADAM28Q9UKQ2 775 aa15.23■□□□□ 0.03
XRCC1-201ENST00000262887 MAFBQ9Y5Q3 323 aaPredicted RBP15.23■□□□□ 0.03
XRCC1-201ENST00000262887 TCAF2A6NFQ2 919 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 SOBPA7XYQ1 873 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 CLASP2O75122 1294 aaKnown RBP15.22■□□□□ 0.03
XRCC1-201ENST00000262887 TOMM70O94826 608 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 PIGNO95427 931 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 RXRGP48443 463 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 RGS7P49802 495 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 HK2P52789 917 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 NHSL2Q5HYW2 709 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 FSTL4Q6MZW2 842 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 TTC33Q6PID6 262 aaPredicted RBP15.22■□□□□ 0.03
XRCC1-201ENST00000262887 DCLRE1AQ6PJP8 1040 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 LYSMD3Q7Z3D4 306 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 ZNF786Q8N393 782 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 TMEM130Q8N3G9 435 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 ISL2Q96A47 359 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 NEURL2Q9BR09 285 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 NOL11Q9H8H0 719 aaKnown RBP15.22■□□□□ 0.03
XRCC1-201ENST00000262887 CXorf21Q9HAI6 301 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 MRPL40Q9NQ50 206 aaKnown RBP15.22■□□□□ 0.03
XRCC1-201ENST00000262887 OXSMQ9NWU1 459 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 DUS2Q9NX74 493 aaKnown RBP15.22■□□□□ 0.03
XRCC1-201ENST00000262887 PTBP2Q9UKA9 531 aaKnown RBP15.22■□□□□ 0.03
XRCC1-201ENST00000262887 AFG3L2Q9Y4W6 797 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 GRID2O43424 1007 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 VDRP11473 427 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 UGT1A6P19224 532 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 TFEBP19484 476 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 UGT1A1P22309 533 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 UGT1A4P22310 534 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 UGT1A3P35503 534 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 UGT1A5P35504 534 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 NR2C2P49116 596 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 LIMK2P53671 638 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 PSME3P61289 254 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 ARL13AQ5H913 290 aaPredicted RBP15.22■□□□□ 0.03
XRCC1-201ENST00000262887 NANOGP8Q6NSW7 305 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 XKR5Q6UX68 686 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 ADAMTS16Q8TE57 1224 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 TFAP2CQ92754 450 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 TOP1MTQ969P6 601 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 ITPKCQ96DU7 683 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 DRC3Q9H069 523 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 HESX1Q9UBX0 185 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 FAM32AQ9Y421 112 aaKnown RBP15.22■□□□□ 0.03
XRCC1-201ENST00000262887 ZNF646O15015 1829 aaPredicted RBP15.22■□□□□ 0.03
XRCC1-201ENST00000262887 KIAA1217Q5T5P2 1943 aa15.22■□□□□ 0.03
XRCC1-201ENST00000262887 H3BMQ9 156 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 BAIAP3O94812 1187 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 MPOP05164 745 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 NFKBIAP25963 317 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 GABRB3P28472 473 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 SLC7A1P30825 629 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 ABCG1P45844 678 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 GRIA4P48058 902 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 EFNA5P52803 228 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 ATP1A4Q13733 1029 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 DCAF6Q58WW2 860 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 PCDH20Q8N6Y1 951 aaKnown RBP15.21■□□□□ 0.03
XRCC1-201ENST00000262887 ZNF420Q8TAQ5 688 aaPredicted RBP15.21■□□□□ 0.03
XRCC1-201ENST00000262887 SLCO4A1Q96BD0 722 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 COG8Q96MW5 612 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 PGLYRP2Q96PD5 576 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 DTLQ9NZJ0 730 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 ZDHHC2Q9UIJ5 367 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 SIX4Q9UIU6 781 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 COPG1Q9Y678 874 aaKnown RBP15.21■□□□□ 0.03
XRCC1-201ENST00000262887 B4GALT4O60513 344 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 PRKCBP05771 671 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 INHBBP09529 407 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 CDH3P22223 829 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 HMBOX1Q6NT76 420 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 NIPAL1Q6NVV3 410 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 TTC30AQ86WT1 665 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 TNIP2Q8NFZ5 429 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 CHPT1Q8WUD6 406 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 PPWD1Q96BP3 646 aaKnown RBP15.21■□□□□ 0.03
XRCC1-201ENST00000262887 EFHD1Q9BUP0 239 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 NPLQ9BXD5 320 aaPredicted RBP15.21■□□□□ 0.03
XRCC1-201ENST00000262887 CEP41Q9BYV8 373 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 ARMC7Q9H6L4 198 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 VTI1BQ9UEU0 232 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 TSPAN16Q9UKR8 245 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 PCDHGA7Q9Y5G6 932 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 PTPRFP10586 1907 aa15.21■□□□□ 0.03
XRCC1-201ENST00000262887 DPYSL4O14531 572 aa15.21■□□□□ 0.02
XRCC1-201ENST00000262887 JUNP05412 331 aaKnown RBP15.21■□□□□ 0.02
XRCC1-201ENST00000262887 C2P06681 752 aa15.21■□□□□ 0.02
XRCC1-201ENST00000262887 TMED10P49755 219 aaKnown RBP15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms