RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 BDH2Q9BUT1 245 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 DDX18Q9NVP1 670 aaKnown RBP12.27□□□□□ -0.45
COL8A1-201ENST00000261037 SESN1Q9Y6P5 492 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 FFAR3O14843 346 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 GPR42O15529 346 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 LDLRP01130 860 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 LRPAP1P30533 357 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 S100A3P33764 101 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 CDK16Q00536 496 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 ST3GAL1Q11201 340 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 CELF3Q5SZQ8 465 aaKnown RBP12.27□□□□□ -0.45
COL8A1-201ENST00000261037 CLYBLQ8N0X4 340 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 HELQQ8TDG4 1101 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 SOCS4Q8WXH5 440 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 TLR10Q9BXR5 811 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 BTBD7Q9P203 1132 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 DPP7Q9UHL4 492 aa12.27□□□□□ -0.45
COL8A1-201ENST00000261037 TBC1D3BA6NDS4 549 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 MYL12BO14950 172 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 CLOCKO15516 846 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 KCNH1O95259 989 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 GJB1P08034 283 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 SPIDRQ14159 915 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 ZSWIM7Q19AV6 140 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 PDZK1Q5T2W1 519 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 CXCL17Q6UXB2 119 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 ZCCHC9Q8N567 271 aaKnown RBP12.26□□□□□ -0.45
COL8A1-201ENST00000261037 EFCAB3Q8N7B9 438 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 TSEN2Q8NCE0 465 aaKnown RBP12.26□□□□□ -0.45
COL8A1-201ENST00000261037 SOHLH2Q9NX45 425 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 LYVE1Q9Y5Y7 322 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 UMODL1Q5DID0 1318 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 CXCL11O14625 94 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 PROCP04070 461 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 NEK3P51956 506 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 MAMLD1Q13495 774 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 NRF1Q16656 503 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 ZNF544Q6NX49 715 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 ZPBP2Q6X784 338 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 PROX1Q92786 737 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 RMND5BQ96G75 393 aaPredicted RBP12.26□□□□□ -0.45
COL8A1-201ENST00000261037 PANX3Q96QZ0 392 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 OLFM1Q99784 485 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 CORO1BQ9BR76 489 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 FAM126AQ9BYI3 521 aaPredicted RBP12.26□□□□□ -0.45
COL8A1-201ENST00000261037 RNF208Q9H0X6 261 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 HMX1Q9NP08 348 aaPredicted RBP12.26□□□□□ -0.45
COL8A1-201ENST00000261037 PACSIN3Q9UKS6 424 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 SPATA2Q9UM82 520 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 BTRCQ9Y297 605 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 SMIM22K7EJ46 135 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 APOC4-APOC2K7ER74 178 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 EPN2O95208 641 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 APOC2P02655 101 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 PAICSP22234 425 aaKnown RBP12.26□□□□□ -0.45
COL8A1-201ENST00000261037 GLRA2P23416 452 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 POLD2P49005 469 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 SLC34A1Q06495 639 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 GALNT3Q14435 633 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 TSNQ15631 228 aaKnown RBP12.26□□□□□ -0.45
COL8A1-201ENST00000261037 ATP13A4Q4VNC1 1196 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 ZNF618Q5T7W0 954 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 LZTR1Q8N653 840 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 SUSD6Q92537 303 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 EPS8L2Q9H6S3 715 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 MCM8Q9UJA3 840 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 ENTPD4Q9Y227 616 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 CHKBQ9Y259 395 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 BCL9O00512 1426 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 PIAS1O75925 651 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 KLHL18O94889 574 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 OR6A2O95222 327 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 PGK1P00558 417 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 TSPAN19P0C672 248 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 CTSEP14091 401 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 VEGFAP15692 232 aaPredicted RBP12.26□□□□□ -0.45
COL8A1-201ENST00000261037 SERPINA4P29622 427 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 ST13P50502 369 aaKnown RBP12.26□□□□□ -0.45
COL8A1-201ENST00000261037 OAZ1P54368 228 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 STX4Q12846 297 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 CYP2A13Q16696 494 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 PARP6Q2NL67 630 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 ARMC4Q5T2S8 1044 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 NIPA1Q7RTP0 329 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 POLNQ7Z5Q5 900 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 CLVS1Q8IUQ0 354 aaPredicted RBP12.26□□□□□ -0.45
COL8A1-201ENST00000261037 KATNAL2Q8IYT4 538 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 ZNF276Q8N554 614 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 MYLPFQ96A32 169 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 TM6SF2Q9BZW4 377 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 PORCNQ9H237 461 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 ZNHIT2Q9UHR6 403 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 KIF1AQ12756 1690 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 MYPNQ86TC9 1320 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 ANKDD1BA6NHY2 528 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 CLDN5O00501 218 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 TRUB2O95900 331 aaKnown RBP12.26□□□□□ -0.45
COL8A1-201ENST00000261037 CCL23P55773 120 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 HSPA14Q0VDF9 509 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 TAF13Q15543 124 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms