RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 SIT1Q9Y3P8 196 aa21.14■□□□□ 0.98
RTCA-201ENST00000260563 ARHGAP42A6NI28 874 aa21.14■□□□□ 0.97
RTCA-201ENST00000260563 DFFAO00273 331 aa21.14■□□□□ 0.97
RTCA-201ENST00000260563 MCF2LO15068 1137 aa21.14■□□□□ 0.97
RTCA-201ENST00000260563 ACVRL1P37023 503 aa21.14■□□□□ 0.97
RTCA-201ENST00000260563 SLC10A2Q12908 348 aaPredicted RBP21.14■□□□□ 0.97
RTCA-201ENST00000260563 BYSLQ13895 437 aaKnown RBP21.14■□□□□ 0.97
RTCA-201ENST00000260563 E2F5Q15329 346 aa21.14■□□□□ 0.97
RTCA-201ENST00000260563 TTC27Q6P3X3 843 aa21.14■□□□□ 0.97
RTCA-201ENST00000260563 BZW1Q7L1Q6 419 aaKnown RBP21.14■□□□□ 0.97
RTCA-201ENST00000260563 ZNF513Q8N8E2 541 aaPredicted RBP21.14■□□□□ 0.97
RTCA-201ENST00000260563 SLC35B2Q8TB61 432 aa21.14■□□□□ 0.97
RTCA-201ENST00000260563 CYB5D2Q8WUJ1 264 aa21.14■□□□□ 0.97
RTCA-201ENST00000260563 ACDQ96AP0 544 aa21.14■□□□□ 0.97
RTCA-201ENST00000260563 HMCESQ96FZ2 354 aa21.14■□□□□ 0.97
RTCA-201ENST00000260563 RUNDC3BQ96NL0 473 aa21.14■□□□□ 0.97
RTCA-201ENST00000260563 SLC25A13Q9UJS0 675 aa21.14■□□□□ 0.97
RTCA-201ENST00000260563 DNPEPQ9ULA0 475 aa21.14■□□□□ 0.97
RTCA-201ENST00000260563 HPCAL4Q9UM19 191 aa21.14■□□□□ 0.97
RTCA-201ENST00000260563 CKAP5Q14008 2032 aa21.13■□□□□ 0.97
RTCA-201ENST00000260563 CBX4O00257 560 aa21.13■□□□□ 0.97
RTCA-201ENST00000260563 MAP3K6O95382 1288 aa21.13■□□□□ 0.97
RTCA-201ENST00000260563 DLDP09622 509 aaKnown RBP21.13■□□□□ 0.97
RTCA-201ENST00000260563 TIE1P35590 1138 aa21.13■□□□□ 0.97
RTCA-201ENST00000260563 KIR2DL1P43626 348 aaPredicted RBP21.13■□□□□ 0.97
RTCA-201ENST00000260563 EIF3EP60228 445 aaKnown RBP21.13■□□□□ 0.97
RTCA-201ENST00000260563 TUBB4BP68371 445 aa21.13■□□□□ 0.97
RTCA-201ENST00000260563 TEX35Q5T0J7 233 aa21.13■□□□□ 0.97
RTCA-201ENST00000260563 AFMIDQ63HM1 303 aa21.13■□□□□ 0.97
RTCA-201ENST00000260563 EGFLAMQ63HQ2 1017 aa21.13■□□□□ 0.97
RTCA-201ENST00000260563 ARHGAP12Q8IWW6 846 aa21.13■□□□□ 0.97
RTCA-201ENST00000260563 KCNV2Q8TDN2 545 aa21.13■□□□□ 0.97
RTCA-201ENST00000260563 SORCS1Q8WY21 1168 aa21.13■□□□□ 0.97
RTCA-201ENST00000260563 NKD2Q969F2 451 aaPredicted RBP21.13■□□□□ 0.97
RTCA-201ENST00000260563 ACE2Q9BYF1 805 aaPredicted RBP21.13■□□□□ 0.97
RTCA-201ENST00000260563 SLC39A8Q9C0K1 460 aa21.13■□□□□ 0.97
RTCA-201ENST00000260563 VPS51Q9UID3 782 aa21.13■□□□□ 0.97
RTCA-201ENST00000260563 RAD54BQ9Y620 910 aa21.13■□□□□ 0.97
RTCA-201ENST00000260563 KMT2EQ8IZD2 1858 aa21.12■□□□□ 0.97
RTCA-201ENST00000260563 SNAP91O60641 907 aa21.12■□□□□ 0.97
RTCA-201ENST00000260563 AOC1P19801 751 aa21.12■□□□□ 0.97
RTCA-201ENST00000260563 KCNJ1P48048 391 aa21.12■□□□□ 0.97
RTCA-201ENST00000260563 MRPS21P82921 87 aaKnown RBP21.12■□□□□ 0.97
RTCA-201ENST00000260563 ECT2LQ008S8 904 aa21.12■□□□□ 0.97
RTCA-201ENST00000260563 FZD5Q13467 585 aa21.12■□□□□ 0.97
RTCA-201ENST00000260563 C2orf27AQ580R0 203 aa21.12■□□□□ 0.97
RTCA-201ENST00000260563 C8orf74Q6P047 294 aa21.12■□□□□ 0.97
RTCA-201ENST00000260563 TRMT11Q7Z4G4 463 aaKnown RBP21.12■□□□□ 0.97
RTCA-201ENST00000260563 NETO2Q8NC67 525 aa21.12■□□□□ 0.97
RTCA-201ENST00000260563 RPLP0P6Q8NHW5 317 aa21.12■□□□□ 0.97
RTCA-201ENST00000260563 PBXIP1Q96AQ6 731 aa21.12■□□□□ 0.97
RTCA-201ENST00000260563 OLFM3Q96PB7 478 aa21.12■□□□□ 0.97
RTCA-201ENST00000260563 PCYOX1Q9UHG3 505 aa21.12■□□□□ 0.97
RTCA-201ENST00000260563 AMACRQ9UHK6 382 aa21.12■□□□□ 0.97
RTCA-201ENST00000260563 PLA2G4CQ9UP65 541 aa21.12■□□□□ 0.97
RTCA-201ENST00000260563 NPC1O15118 1278 aa21.11■□□□□ 0.97
RTCA-201ENST00000260563 SRPRAP08240 638 aaKnown RBP21.11■□□□□ 0.97
RTCA-201ENST00000260563 RBP3P10745 1247 aa21.11■□□□□ 0.97
RTCA-201ENST00000260563 GLDCP23378 1020 aa21.11■□□□□ 0.97
RTCA-201ENST00000260563 CTSOP43234 321 aaPredicted RBP21.11■□□□□ 0.97
RTCA-201ENST00000260563 RPS9P46781 194 aaKnown RBP21.11■□□□□ 0.97
RTCA-201ENST00000260563 PAPOLAP51003 745 aaKnown RBP21.11■□□□□ 0.97
RTCA-201ENST00000260563 ST8SIA6P61647 398 aa21.11■□□□□ 0.97
RTCA-201ENST00000260563 XRCC4Q13426 336 aa21.11■□□□□ 0.97
RTCA-201ENST00000260563 SERINC3Q13530 473 aa21.11■□□□□ 0.97
RTCA-201ENST00000260563 OASLQ15646 514 aaKnown RBP21.11■□□□□ 0.97
RTCA-201ENST00000260563 EMC10Q5UCC4 262 aa21.11■□□□□ 0.97
RTCA-201ENST00000260563 Q6ZS52 159 aa21.11■□□□□ 0.97
RTCA-201ENST00000260563 ZC3H18Q86VM9 953 aaKnown RBP21.11■□□□□ 0.97
RTCA-201ENST00000260563 ATPAF2Q8N5M1 289 aa21.11■□□□□ 0.97
RTCA-201ENST00000260563 MYRIPQ8NFW9 859 aa21.11■□□□□ 0.97
RTCA-201ENST00000260563 ATL2Q8NHH9 583 aa21.11■□□□□ 0.97
RTCA-201ENST00000260563 USP33Q8TEY7 942 aa21.11■□□□□ 0.97
RTCA-201ENST00000260563 CLDN23Q96B33 292 aa21.11■□□□□ 0.97
RTCA-201ENST00000260563 CCDC114Q96M63 670 aa21.11■□□□□ 0.97
RTCA-201ENST00000260563 ZDHHC4Q9NPG8 344 aa21.11■□□□□ 0.97
RTCA-201ENST00000260563 THAP10Q9P2Z0 257 aaPredicted RBP21.11■□□□□ 0.97
RTCA-201ENST00000260563 ERVW-1Q9UQF0 538 aa21.11■□□□□ 0.97
RTCA-201ENST00000260563 DRG1Q9Y295 367 aaKnown RBP21.11■□□□□ 0.97
RTCA-201ENST00000260563 ANTXRLA6NF34 631 aa21.1■□□□□ 0.97
RTCA-201ENST00000260563 KDELR3O43731 214 aa21.1■□□□□ 0.97
RTCA-201ENST00000260563 ITGAVP06756 1048 aa21.1■□□□□ 0.97
RTCA-201ENST00000260563 DCNP07585 359 aaKnown RBP21.1■□□□□ 0.97
RTCA-201ENST00000260563 HNRNPLP14866 589 aaKnown RBP eCLIP21.1■□□□□ 0.973e-7■■□□□ 13.7
RTCA-201ENST00000260563 MAGEA9P43362 315 aa21.1■□□□□ 0.97
RTCA-201ENST00000260563 ARF5P84085 180 aa21.1■□□□□ 0.97
RTCA-201ENST00000260563 DR1Q01658 176 aa21.1■□□□□ 0.97
RTCA-201ENST00000260563 DHX34Q14147 1143 aaKnown RBP21.1■□□□□ 0.97
RTCA-201ENST00000260563 ZNF234Q14588 700 aa21.1■□□□□ 0.97
RTCA-201ENST00000260563 PTPRNQ16849 979 aa21.1■□□□□ 0.97
RTCA-201ENST00000260563 FNDC3BQ53EP0 1204 aaKnown RBP21.1■□□□□ 0.97
RTCA-201ENST00000260563 GLE1Q53GS7 698 aaKnown RBP21.1■□□□□ 0.97
RTCA-201ENST00000260563 CCDC70Q6NSX1 233 aa21.1■□□□□ 0.97
RTCA-201ENST00000260563 RETSATQ6NUM9 610 aa21.1■□□□□ 0.97
RTCA-201ENST00000260563 MAATS1Q7Z4T9 603 aa21.1■□□□□ 0.97
RTCA-201ENST00000260563 TP53INP2Q8IXH6 220 aa21.1■□□□□ 0.97
RTCA-201ENST00000260563 CHPFQ8IZ52 775 aa21.1■□□□□ 0.97
RTCA-201ENST00000260563 CCDC33Q8N5R6 958 aa21.1■□□□□ 0.97
RTCA-201ENST00000260563 GRK7Q8WTQ7 553 aa21.1■□□□□ 0.97
RTCA-201ENST00000260563 UBXN4Q92575 508 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms