RNA–Protein interactions for RNA: ENST00000260383.11

TUBGCP4-201, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUBGCP4, Length 2,617 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-201ENST00000260383 RAD23AP54725 363 aa13.52□□□□□ -0.25
TUBGCP4-201ENST00000260383 CDH6P55285 790 aa13.52□□□□□ -0.25
TUBGCP4-201ENST00000260383 NIPAL4Q0D2K0 466 aa13.52□□□□□ -0.25
TUBGCP4-201ENST00000260383 PLCL1Q15111 1095 aa13.52□□□□□ -0.25
TUBGCP4-201ENST00000260383 PTPN20Q4JDL3 420 aa13.52□□□□□ -0.25
TUBGCP4-201ENST00000260383 XKR9Q5GH70 373 aa13.52□□□□□ -0.25
TUBGCP4-201ENST00000260383 SEL1L3Q68CR1 1132 aa13.52□□□□□ -0.25
TUBGCP4-201ENST00000260383 MFSD2AQ8NA29 543 aa13.52□□□□□ -0.25
TUBGCP4-201ENST00000260383 ZC3H15Q8WU90 426 aaKnown RBP13.52□□□□□ -0.25
TUBGCP4-201ENST00000260383 ILKAPQ9H0C8 392 aaPredicted RBP13.52□□□□□ -0.25
TUBGCP4-201ENST00000260383 TMEM9Q9P0T7 183 aa13.52□□□□□ -0.25
TUBGCP4-201ENST00000260383 NYAP2Q9P242 653 aa13.52□□□□□ -0.25
TUBGCP4-201ENST00000260383 CYTH4Q9UIA0 394 aa13.52□□□□□ -0.25
TUBGCP4-201ENST00000260383 CLDN25C9JDP6 229 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 TOR1BO14657 336 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 CLOCKO15516 846 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 DHX15O43143 795 aaKnown RBP13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 PAPSS1O43252 624 aaPredicted RBP13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 TPST1O60507 370 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 BMP2P12643 396 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 ZNF132P52740 706 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 IRF9Q00978 393 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 TAP1Q03518 808 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 SPCS2Q15005 226 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 STILQ15468 1287 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 PITRM1Q5JRX3 1037 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 C6orf10Q5SRN2 563 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 PIGZQ86VD9 579 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 PDZD8Q8NEN9 1154 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 OR5B17Q8NGF7 314 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 TP63Q9H3D4 680 aaPredicted RBP13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 ZDHHC2Q9UIJ5 367 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 PSME2Q9UL46 239 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 AP4E1Q9UPM8 1137 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 TANC1Q9C0D5 1861 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 TRIM24O15164 1050 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 GDF11O95390 407 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 TRUB2O95900 331 aaKnown RBP13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 IL1R1P14778 569 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 YBX3P16989 372 aaKnown RBP eCLIP13.51□□□□□ -0.251e-6■■□□□ 12.5
TUBGCP4-201ENST00000260383 TFEBP19484 476 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 PROZP22891 400 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 CCT8P50990 548 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 TMBIM6P55061 237 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 CLDN10P78369 228 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 CLCQ05315 142 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 DMP1Q13316 513 aaPredicted RBP13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 AQP6Q13520 282 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 DLG2Q15700 870 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 DGKDQ16760 1214 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 INSCQ1MX18 579 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 ZBTB41Q5SVQ8 909 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 CYP2U1Q7Z449 544 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 LDHDQ86WU2 507 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 ANKRD13BQ86YJ7 626 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 CCDC60Q8IWA6 550 aaPredicted RBP13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 ATP6V0D2Q8N8Y2 350 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 USP33Q8TEY7 942 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 RSAD1Q9HA92 442 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 SNX15Q9NRS6 342 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 KCNH7Q9NS40 1196 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 USP18Q9UMW8 372 aa13.51□□□□□ -0.25
TUBGCP4-201ENST00000260383 KRT75O95678 551 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 EIF2S1P05198 315 aaKnown RBP13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 ABCG1P45844 678 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 CACNB3P54284 484 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 DENND1BQ6P3S1 775 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 CES3Q6UWW8 571 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 LAYNQ6UX15 382 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 PLD5Q8N7P1 536 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 CNTD1Q8N815 330 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 SNX31Q8N9S9 440 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 MCUQ8NE86 351 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 LILRB4Q8NHJ6 448 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 RIT2Q99578 217 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 IL12RB2Q99665 862 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 RAD21L1Q9H4I0 556 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 GREB1LQ9C091 1923 aaPredicted RBP13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 RNF103-CHMP3A0A140T963 221 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 TRIM13O60858 407 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 PIGNO95427 931 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 NCAM1P13591 858 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 MAGEA6P43360 314 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 RPL14P50914 215 aaKnown RBP13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 TSPY1Q01534 308 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 ZNF846Q147U1 533 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 HERC3Q15034 1050 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 ARL13AQ5H913 290 aaPredicted RBP13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 ABRAXAS1Q6UWZ7 409 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 TAS1R3Q7RTX0 852 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 ERMP1Q7Z2K6 904 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 CAMK1DQ8IU85 385 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 IQCF2Q8IXL9 164 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 HOXD1Q9GZZ0 328 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 CAB39LQ9H9S4 337 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 DKK3Q9UBP4 350 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 AURKCQ9UQB9 309 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 TLL2Q9Y6L7 1015 aa13.5□□□□□ -0.25
TUBGCP4-201ENST00000260383 DYTNA2CJ06 578 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms