RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 BPNT1O95861 308 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 HTR7P34969 479 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 KPNA2P52292 529 aaKnown RBP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 ATP6V0D1P61421 351 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 GTF2IP78347 998 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 BNIP3Q12983 259 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 TEAD4Q15561 434 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 FBXO48Q5FWF7 155 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 KRT40Q6A162 431 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 KRT25Q7Z3Z0 450 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 MB21D2Q8IYB1 491 aaPredicted RBP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 FBXW8Q8N3Y1 598 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 HM13Q8TCT9 377 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 NR4A3Q92570 626 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 PAGE5Q96GU1 130 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 MRM3Q9HC36 420 aaKnown RBP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 CPNE5Q9HCH3 593 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 SMYD2Q9NRG4 433 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 MRPS23Q9Y3D9 190 aaKnown RBP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 MON2Q7Z3U7 1717 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 WDPCPO95876 746 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 RPS2P15880 293 aaKnown RBP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 PVALBP20472 110 aaPredicted RBP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 TGM2P21980 687 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 CDKL1Q00532 357 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 PURAQ00577 322 aaKnown RBP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 MMRN1Q13201 1228 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 ATAD3CQ5T2N8 411 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 CCNYL2Q5T2Q4 361 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 IQSEC1Q6DN90 963 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 TIGD7Q6NT04 549 aaPredicted RBP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 PIGWQ7Z7B1 504 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 DNAAF5Q86Y56 855 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 SLC13A5Q86YT5 568 aaPredicted RBP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 CYP4Z2PQ8N1L4 340 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 CADM2Q8N3J6 435 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 LINC00301Q8NCQ3 95 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 TEKT5Q96M29 485 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 DYRK4Q9NR20 520 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 SEMA3GQ9NS98 782 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 TMEM9Q9P0T7 183 aa6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.85□□□□□ -1.31
PDGFRA-201ENST00000257290 MAP2P11137 1827 aaKnown RBP6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 HDAC3O15379 428 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 GSC2O15499 205 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 HSPA4LO95757 839 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 ABL1P00519 1130 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 SERPING1P05155 500 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 PSMB9P28065 219 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 ERP29P30040 261 aaKnown RBP6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 TMEM132BQ14DG7 1078 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 SLC39A14Q15043 492 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 TGFBIQ15582 683 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 LDLRAP1Q5SW96 308 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 FAM205BPQ63HN1 556 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 BNC2Q6ZN30 1099 aaPredicted RBP6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 PAGE2Q7Z2X7 111 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 IQCKQ8N0W5 287 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 CLYBLQ8N0X4 340 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 AADATQ8N5Z0 425 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 PLD5Q8N7P1 536 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 KLHL6Q8WZ60 621 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 KLF6Q99612 283 aaPredicted RBP6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 KCTD14Q9BQ13 255 aaPredicted RBP6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 USB1Q9BQ65 265 aaKnown RBP6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 SLC22A4Q9H015 551 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 MUC3BQ9H195 1237 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 NIT2Q9NQR4 276 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 PPP1R14DQ9NXH3 145 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 VSX1Q9NZR4 365 aaPredicted RBP6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 SUCOQ9UBS9 1254 aaKnown RBP6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 CHKBQ9Y259 395 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 SLC45A1Q9Y2W3 748 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 V9GY48 417 aaPredicted RBP6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 SHPRHQ149N8 1683 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 TM9SF1O15321 606 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 OR6B1O95007 311 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 UGT2B4P06133 528 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 LCKP06239 509 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 CDK1P06493 297 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 ENO3P13929 434 aaPredicted RBP6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 HNF4AP41235 474 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 MAZP56270 477 aaKnown RBP6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 HSPA14Q0VDF9 509 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 DTHD1Q6ZMT9 781 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 FBXO33Q7Z6M2 555 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 ZNF654Q8IZM8 581 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 OR4C6Q8NH72 309 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 SNX19Q92543 992 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 SLC6A17Q9H1V8 727 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 PIH1D1Q9NWS0 290 aaKnown RBP6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 CMTM6Q9NX76 183 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 GNG8Q9UK08 70 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 MYO3BQ8WXR4 1341 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 RFPL2O75678 378 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 AP2A1O95782 977 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 ADSSP30520 456 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 STT3AP46977 705 aa6.84□□□□□ -1.31
PDGFRA-201ENST00000257290 ARFIP1P53367 373 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms