RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 MAGEA9P43362 315 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 AGBL2Q5U5Z8 902 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 RFX8Q6ZV50 586 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 SPATA4Q8NEY3 305 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 SHC3Q92529 594 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 IGSF21Q96ID5 467 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 TRIT1Q9H3H1 467 aaKnown RBP13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 ENTPD4Q9Y227 616 aa13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 N4BP2Q86UW6 1770 aaPredicted RBP13.64□□□□□ -0.23
PRPF38A-201ENST00000257181 EDNRBP24530 442 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 NTSP30990 170 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 CCNFP41002 786 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 ARFIP2P53365 341 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 DDR2Q16832 855 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 KBTBD6Q86V97 674 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 LRRC46Q96FV0 321 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 CLCN5P51795 746 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 GRIN1Q05586 938 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 FAM183BPQ6ZVS7 135 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 DNAJC19Q96DA6 116 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 RGS17Q9UGC6 210 aaPredicted RBP13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 ASTN1O14525 1302 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 A0A0A0MRY4 1105 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 GRK2P25098 689 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 SLC8A1P32418 973 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 HPCAL1P37235 193 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 MSLNQ13421 630 aaPredicted RBP13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 BOP1Q14137 746 aaKnown RBP13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 SCUBE3Q8IX30 993 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 OR56A4Q8NGH8 313 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 SPATA13Q96N96 652 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 A0A1W2PQH9 124 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 TXNDC9O14530 226 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 CHADO15335 359 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 VIPP01282 170 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 ZNF865P0CJ78 1059 aaPredicted RBP13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 CYP20A1Q6UW02 462 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 ZNF461Q8TAF7 563 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 GMIPQ9P107 970 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 IGSF9Q9P2J2 1179 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 MFHAS1Q9Y4C4 1052 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 PAPPAQ13219 1627 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 UBXN8O00124 270 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 ENPP3O14638 875 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 LILRB3O75022 631 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 LILRA4P59901 499 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 ORC1Q13415 861 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 TXNDC11Q6PKC3 985 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 SLC26A9Q7LBE3 791 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 PRRX2Q99811 253 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 NKX2-4Q9H2Z4 354 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 ATAD3AQ9NVI7 634 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 CDC14AQ9UNH5 594 aa13.63□□□□□ -0.23
PRPF38A-201ENST00000257181 ANKDD1BA6NHY2 528 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 B4GALT5O43286 388 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 PSMD8P48556 350 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 CDK7P50613 346 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 CCNG1P51959 295 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 KDSRQ06136 332 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 ACTN3Q08043 901 aaPredicted RBP13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 PDCD2Q16342 344 aaPredicted RBP13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 POTEHQ6S545 545 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 ZNF852Q6ZMS4 543 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 PHTF1Q9UMS5 762 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 BTAF1O14981 1849 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 STRCQ7RTU9 1775 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 NT5C1B-RDH14C9J2C7 533 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 VEGFDO43915 354 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 CLCNKBP51801 687 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 MRPS22P82650 360 aaKnown RBP13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 C3orf62Q6ZUJ4 267 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 CHMP1BQ7LBR1 199 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 RUBCNLQ9H714 662 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 MPP6Q9NZW5 540 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 HES2Q9Y543 173 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 INPP1P49441 399 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 FUT2Q10981 343 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 EIF4HQ15056 248 aaKnown RBP13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 LDLRAP1Q5SW96 308 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 FBXO38Q6PIJ6 1188 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 AGMOQ6ZNB7 445 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 RAB7BQ96AH8 199 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 LRIG1Q96JA1 1093 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 MRPL1Q9BYD6 325 aaKnown RBP13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 ISCUQ9H1K1 167 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 GDAP2Q9NXN4 497 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 PPARGC1AQ9UBK2 798 aaKnown RBP13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 ENOPH1Q9UHY7 261 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 GGT7Q9UJ14 662 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 CPQQ9Y646 472 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 RNASEH2AO75792 299 aaKnown RBP13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 ATP6V0D1P61421 351 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 LPIN1Q14693 890 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 CBX2Q14781 532 aaPredicted RBP13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 ARHGEF19Q8IW93 802 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 SLC22A18Q96BI1 424 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 MIEF1Q9NQG6 463 aa13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 CDV3Q9UKY7 258 aaKnown RBP13.62□□□□□ -0.23
PRPF38A-201ENST00000257181 ARFGEF2Q9Y6D5 1785 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms