RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 TEPSINQ96N21 525 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 PWWP2AQ96N64 755 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 GAS2L1Q99501 681 aaPredicted RBP11.17□□□□□ -0.62
COPA-201ENST00000241704 OCEL1Q9H607 264 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 RAB26Q9ULW5 256 aa11.17□□□□□ -0.62
COPA-201ENST00000241704 NHSL1Q5SYE7 1610 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 RNF103-CHMP3A0A140T963 221 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 GPR25O00155 361 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 TGDSO95455 350 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 PROCP04070 461 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 SELPP16109 830 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 STMN1P16949 149 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 ZNF143P52747 638 aaPredicted RBP11.16□□□□□ -0.62
COPA-201ENST00000241704 ENPEPQ07075 957 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 MPP2Q14168 576 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 ZNF786Q8N393 782 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 LPPQ93052 612 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 APOPT1Q96IL0 206 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 STN1Q9H668 368 aaKnown RBP11.16□□□□□ -0.62
COPA-201ENST00000241704 FAIMQ9NVQ4 179 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 ADA2Q9NZK5 511 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 FAM50BQ9Y247 325 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 PCDHA2Q9Y5H9 948 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 AOC2O75106 756 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 JCHAINP01591 159 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 KRT8P05787 483 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 USP41Q3LFD5 358 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 OOSP2Q86WS3 158 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 ANKRD52Q8NB46 1076 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 BLOC1S5Q8TDH9 187 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 BRI3BPQ8WY22 251 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 TMEM79Q9BSE2 394 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 LRRC40Q9H9A6 602 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 LTFP02788 710 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 NOS2P35228 1153 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 PCDHB18PQ96TA0 734 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 TLE6Q9H808 572 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 GIN1Q9NXP7 522 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 COL18A1P39060 1754 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 JAM2P57087 298 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 POU5F1Q01860 360 aaKnown RBP11.16□□□□□ -0.62
COPA-201ENST00000241704 ITGADQ13349 1161 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 NR1D2Q14995 579 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 TMA16Q96EY4 203 aaKnown RBP11.16□□□□□ -0.62
COPA-201ENST00000241704 ELMO2Q96JJ3 720 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 PHF12Q96QT6 1004 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 CORO1BQ9BR76 489 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 ULBP1Q9BZM6 244 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 TASP1Q9H6P5 420 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 CASS4Q9NQ75 786 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 PPM1HQ9ULR3 514 aa11.16□□□□□ -0.62
COPA-201ENST00000241704 BAZ2AQ9UIF9 1905 aaKnown RBP11.15□□□□□ -0.62
COPA-201ENST00000241704 A0A087WXM4 84 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 HTR3EA5X5Y0 456 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 UNCXA6NJT0 531 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 PCDH8O95206 1070 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 NPR3P17342 541 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 CHRM3P20309 590 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 PPIGQ13427 754 aaKnown RBP eCLIP11.15□□□□□ -0.624e-7■■■□□ 15.2
COPA-201ENST00000241704 ZNF284Q2VY69 593 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 FOXB2Q5VYV0 432 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 ANKS3Q6ZW76 656 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 COLGALT1Q8NBJ5 622 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 SERPINB11Q96P15 392 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 MIPEPQ99797 713 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 GPATCH1Q9BRR8 931 aaKnown RBP11.15□□□□□ -0.62
COPA-201ENST00000241704 APOL5Q9BWW9 433 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 BRD8Q9H0E9 1235 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 ASAH2Q9NR71 780 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 CARD8Q9Y2G2 431 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 A0A1W2PPM1 405 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 PARNO95453 639 aaKnown RBP11.15□□□□□ -0.62
COPA-201ENST00000241704 JAK1P23458 1154 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 RPL9P32969 192 aaKnown RBP11.15□□□□□ -0.62
COPA-201ENST00000241704 HALP42357 657 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 ZNF135P52742 658 aaPredicted RBP11.15□□□□□ -0.62
COPA-201ENST00000241704 SLC18A1P54219 525 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 MRPS15P82914 257 aaKnown RBP11.15□□□□□ -0.62
COPA-201ENST00000241704 PHC3Q8NDX5 983 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 C18orf25Q96B23 403 aaPredicted RBP11.15□□□□□ -0.62
COPA-201ENST00000241704 UROC1Q96N76 676 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 PRDM16Q9HAZ2 1276 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 EML4Q9HC35 981 aaKnown RBP11.15□□□□□ -0.62
COPA-201ENST00000241704 CYLDQ9NQC7 956 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 FAM105AQ9NUU6 356 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 PKD2L2Q9NZM6 624 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 PCDHGB4Q9UN71 923 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 GIT1Q9Y2X7 761 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 C1orf232A0A0U1RR37 186 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 NT5C1B-RDH14C9J2C7 533 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 H3BNX3 289 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 TSPAN3O60637 253 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 CST3P01034 146 aaPredicted RBP11.15□□□□□ -0.62
COPA-201ENST00000241704 T-ENOLP0DO92 83 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 ENO3P13929 434 aaPredicted RBP11.15□□□□□ -0.62
COPA-201ENST00000241704 TRPC1P48995 793 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 RPL7AP62424 266 aaKnown RBP11.15□□□□□ -0.62
COPA-201ENST00000241704 CREMQ03060 361 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 DLG1Q12959 904 aa11.15□□□□□ -0.62
COPA-201ENST00000241704 KLHL35Q6PF15 583 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms