RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 B3GAT2Q9NPZ5 323 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 CCDC154A6NI56 674 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 ACKR2O00590 384 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 MASP1P48740 699 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 APLP1P51693 650 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 MFSD7Q6UXD7 560 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 KIAA0408Q6ZU52 694 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 CYB5R4Q7L1T6 521 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 MILR1Q7Z6M3 343 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 ACOT1Q86TX2 421 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 TBC1D10CQ8IV04 446 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 LINC00116Q8NCU8 138 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 SLC4A9Q96Q91 983 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 C17orf62Q9BQA9 187 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 DSN1Q9H410 356 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 PCDHA11Q9Y5I1 949 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 FAM196BA6NMK8 535 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 CDC25AP30304 524 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 RAD23BP54727 409 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 TRIM40Q6P9F5 258 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 TMEM154Q6P9G4 183 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 AFTPHQ6ULP2 937 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 RABEPKQ7Z6M1 372 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 ATG16L2Q8NAA4 619 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 COMMD9Q9P000 198 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 AFDNP55196 1824 aaKnown RBP7.53□□□□□ -1.2
MED28-201ENST00000237380 TRDMT1O14717 391 aaKnown RBP7.53□□□□□ -1.2
MED28-201ENST00000237380 PLSCR1O15162 318 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 IL1BP01584 269 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 SRGNP10124 158 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 MAGEA4P43358 317 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 NFYCQ13952 458 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 ZNF697Q5TEC3 545 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 PPP2R2DQ66LE6 453 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 RUSC1Q9BVN2 902 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 C8orf4Q9NR00 106 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 H0YGN5 161 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 ENO1P06733 434 aaKnown RBP7.53□□□□□ -1.2
MED28-201ENST00000237380 TRIM49P0CI25 452 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 TRIM49CP0CI26 452 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 RASGEF1BQ0VAM2 473 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 MTAPQ13126 283 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 SNTA1Q13424 505 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 CBX2Q14781 532 aaPredicted RBP7.53□□□□□ -1.2
MED28-201ENST00000237380 FAM171BQ6P995 826 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.53□□□□□ -1.2
MED28-201ENST00000237380 DENND5BQ6ZUT9 1274 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 CACTIN-AS1Q8N1I8 211 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 DNAJB3Q8WWF6 145 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 C1QTNF1Q9BXJ1 281 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 SLC32A1Q9H598 525 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 A1CFQ9NQ94 594 aaKnown RBP7.53□□□□□ -1.2
MED28-201ENST00000237380 NKIRAS2Q9NYR9 191 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 C19orf25Q9UFG5 118 aaPredicted RBP7.53□□□□□ -1.2
MED28-201ENST00000237380 EOGTQ5NDL2 527 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 ARMC4Q5T2S8 1044 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 VSTM1Q6UX27 236 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 VN1R5Q7Z5H4 357 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 CORO1BQ9BR76 489 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 JMJD4Q9H9V9 463 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 ETNK1Q9HBU6 452 aa7.53□□□□□ -1.2
MED28-201ENST00000237380 CPSF4O95639 269 aaKnown RBP7.52□□□□□ -1.2
MED28-201ENST00000237380 ASLP04424 464 aa7.52□□□□□ -1.2
MED28-201ENST00000237380 RPSAP08865 295 aaKnown RBP7.52□□□□□ -1.2
MED28-201ENST00000237380 ERCC2P18074 760 aa7.52□□□□□ -1.2
MED28-201ENST00000237380 NDUFS1P28331 727 aa7.52□□□□□ -1.2
MED28-201ENST00000237380 TUBP50607 506 aa7.52□□□□□ -1.2
MED28-201ENST00000237380 RAB25P57735 213 aa7.52□□□□□ -1.2
MED28-201ENST00000237380 ZC2HC1CQ53FD0 456 aaPredicted RBP7.52□□□□□ -1.2
MED28-201ENST00000237380 OTOP3Q7RTS5 596 aa7.52□□□□□ -1.2
MED28-201ENST00000237380 OR10H5Q8NGA6 315 aa7.52□□□□□ -1.2
MED28-201ENST00000237380 ZDHHC6Q9H6R6 413 aa7.52□□□□□ -1.2
MED28-201ENST00000237380 AGPAT3Q9NRZ7 376 aa7.52□□□□□ -1.2
MED28-201ENST00000237380 PNMA8BQ9ULN7 279 aaPredicted RBP7.52□□□□□ -1.2
MED28-201ENST00000237380 PCDHA3Q9Y5H8 950 aa7.52□□□□□ -1.2
MED28-201ENST00000237380 NOL4O94818 638 aa7.52□□□□□ -1.21
MED28-201ENST00000237380 KCNH1O95259 989 aa7.52□□□□□ -1.21
MED28-201ENST00000237380 VIPP01282 170 aa7.52□□□□□ -1.21
MED28-201ENST00000237380 CLK2P49760 499 aaKnown RBP7.52□□□□□ -1.21
MED28-201ENST00000237380 INO80DQ53TQ3 878 aaPredicted RBP7.52□□□□□ -1.21
MED28-201ENST00000237380 AMIGO1Q86WK6 493 aa7.52□□□□□ -1.21
MED28-201ENST00000237380 FAM172AQ8WUF8 416 aa7.52□□□□□ -1.21
MED28-201ENST00000237380 ZNF668Q96K58 619 aaPredicted RBP7.52□□□□□ -1.21
MED28-201ENST00000237380 BRINP2Q9C0B6 783 aa7.52□□□□□ -1.21
MED28-201ENST00000237380 KCNQ5Q9NR82 932 aa7.52□□□□□ -1.21
MED28-201ENST00000237380 VPS4AQ9UN37 437 aa7.52□□□□□ -1.21
MED28-201ENST00000237380 ELFN1P0C7U0 828 aa7.52□□□□□ -1.21
MED28-201ENST00000237380 TOP3AQ13472 1001 aaPredicted RBP7.52□□□□□ -1.21
MED28-201ENST00000237380 ADHFE1Q8IWW8 467 aa7.52□□□□□ -1.21
MED28-201ENST00000237380 ETNPPLQ8TBG4 499 aa7.52□□□□□ -1.21
MED28-201ENST00000237380 MMADHCQ9H3L0 296 aaPredicted RBP7.52□□□□□ -1.21
MED28-201ENST00000237380 SLC24A2Q9UI40 661 aa7.52□□□□□ -1.21
MED28-201ENST00000237380 KCNE2Q9Y6J6 123 aa7.52□□□□□ -1.21
MED28-201ENST00000237380 VIL1P09327 827 aaKnown RBP7.52□□□□□ -1.21
MED28-201ENST00000237380 PTPN11Q06124 597 aaPredicted RBP7.52□□□□□ -1.21
MED28-201ENST00000237380 LPIN1Q14693 890 aa7.52□□□□□ -1.21
MED28-201ENST00000237380 TYW3Q6IPR3 259 aaKnown RBP7.52□□□□□ -1.21
MED28-201ENST00000237380 ZCCHC12Q6PEW1 402 aa7.52□□□□□ -1.21
MED28-201ENST00000237380 ZNF720Q7Z2F6 126 aa7.52□□□□□ -1.21
MED28-201ENST00000237380 GPSM1Q86YR5 675 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms