RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 KPNA1P52294 538 aaPredicted RBP13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 C21orf59P57076 290 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 SREBF2Q12772 1141 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 XRRA1Q6P2D8 792 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 OR5B17Q8NGF7 314 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 PNPT1Q8TCS8 783 aaKnown RBP13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 KRCC1Q9NPI7 259 aaPredicted RBP13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 MPP6Q9NZW5 540 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 OR12D3Q9UGF7 316 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 MYRFQ9Y2G1 1151 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 TNS2Q63HR2 1409 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 FBXO21O94952 628 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 CARTPTQ16568 116 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 FNBP1LQ5T0N5 605 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 ZNF618Q5T7W0 954 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 ERO1BQ86YB8 467 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 ZCCHC7Q8N3Z6 543 aaKnown RBP13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 EPS8L1Q8TE68 723 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 CAPSLQ8WWF8 208 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 NARS2Q96I59 477 aaKnown RBP13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 ADAM2Q99965 735 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 FRMD8Q9BZ67 464 aaPredicted RBP13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 EPB41L1Q9H4G0 881 aa13.8□□□□□ -0.2
TGFBR3-201ENST00000212355 PGK1P00558 417 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 CLTBP09497 229 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 ME2P23368 584 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 ABRQ12979 859 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 CRY1Q16526 586 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 LPCAT4Q643R3 524 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 HAS1Q92839 578 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 TAS2R13Q9NYV9 303 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 GAS2O43903 313 aaKnown RBP13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 TRUB2O95900 331 aaKnown RBP13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 RPL22P35268 128 aaKnown RBP13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 FUKQ8N0W3 1084 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 NAT16Q8N8M0 369 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 USP7Q93009 1102 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 SNRNP25Q9BV90 132 aaKnown RBP13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 B3GNT5Q9BYG0 378 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 TRIM8Q9BZR9 551 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 REREQ9P2R6 1566 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 MRPS7Q9Y2R9 242 aaKnown RBP13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 SALL3Q9BXA9 1300 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 AXIN1O15169 862 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 LIASO43766 372 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 ZNF189O75820 626 aaPredicted RBP13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 AUHQ13825 339 aaKnown RBP13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 CMC1Q7Z7K0 106 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 ATXN2LQ8WWM7 1075 aaKnown RBP13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 ATP4AP20648 1035 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 SLC27A1Q6PCB7 646 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 GOLGA2P5Q9HBQ8 144 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 RAB21Q9UL25 225 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 FAM45BPQ6NSW5 357 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 APOBEC3HQ6NTF7 200 aaKnown RBP13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 GALNT5Q7Z7M9 940 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 CCNJLQ8IV13 435 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 KIAA1257Q9ULG3 409 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 C2CD2Q9Y426 696 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 JCADQ9P266 1359 aa13.79□□□□□ -0.2
TGFBR3-201ENST00000212355 KANSL1LA0AUZ9 987 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 RNASEH1O60930 286 aaKnown RBP13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 SNUPNO95149 360 aaKnown RBP13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 TGFB2P61812 414 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 WASHC2DQ5SRD0 308 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 NT5DC1Q5TFE4 455 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 NEK10Q6ZWH5 1172 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 PTGR2Q8N8N7 351 aaPredicted RBP13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 OR56A4Q8NGH8 313 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 RORBQ92753 470 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 PLEKHG4BQ96PX9 1271 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 ADARB2Q9NS39 739 aaKnown RBP13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 TSPAN19P0C672 248 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 GLRA2P23416 452 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 BCL2L1Q07817 233 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 TRAF3Q13114 568 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 CXCL17Q6UXB2 119 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 SENP8Q96LD8 212 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 BDH2Q9BUT1 245 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 EHD3Q9NZN3 535 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 SPACA6W5XKT8 324 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 GPR15P49685 360 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 RPL14P50914 215 aaKnown RBP13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 ADARP55265 1226 aaKnown RBP13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 ZNF268Q14587 947 aaPredicted RBP13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 LDB1Q86U70 411 aaPredicted RBP13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 TMEM132CQ8N3T6 1108 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 DCBLD1Q8N8Z6 715 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 ABCB10Q9NRK6 738 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 SPG21Q9NZD8 308 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 KLHL3Q9UH77 587 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 RAD54BQ9Y620 910 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 PTPRUQ92729 1446 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 PSMD12O00232 456 aaPredicted RBP13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 REXO5Q96IC2 774 aaKnown RBP13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 TRAPPC9Q96Q05 1148 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 MRPL45Q9BRJ2 306 aaKnown RBP13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 TBC1D10AQ9BXI6 508 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 SATB2Q9UPW6 733 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms