RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 CMPK2Q5EBM0 449 aa13.38□□□□□ -0.27
CTNS-201ENST00000046640 FSTL4Q6MZW2 842 aa13.38□□□□□ -0.27
CTNS-201ENST00000046640 PDZD4Q76G19 769 aaPredicted RBP13.38□□□□□ -0.27
CTNS-201ENST00000046640 WDR75Q8IWA0 830 aaKnown RBP13.38□□□□□ -0.27
CTNS-201ENST00000046640 GPR152Q8TDT2 470 aa13.38□□□□□ -0.27
CTNS-201ENST00000046640 EPAS1Q99814 870 aa13.38□□□□□ -0.27
CTNS-201ENST00000046640 APOBEC2Q9Y235 224 aaKnown RBP13.38□□□□□ -0.27
CTNS-201ENST00000046640 KLF11O14901 512 aa13.38□□□□□ -0.27
CTNS-201ENST00000046640 AP2A1O95782 977 aa13.38□□□□□ -0.27
CTNS-201ENST00000046640 ASGR1P07306 291 aa13.38□□□□□ -0.27
CTNS-201ENST00000046640 FGF3P11487 239 aaPredicted RBP13.38□□□□□ -0.27
CTNS-201ENST00000046640 PCSK1P29120 753 aa13.38□□□□□ -0.27
CTNS-201ENST00000046640 GRIK1P39086 918 aa13.38□□□□□ -0.27
CTNS-201ENST00000046640 PPIDQ08752 370 aaKnown RBP13.38□□□□□ -0.27
CTNS-201ENST00000046640 USP4Q13107 963 aa13.38□□□□□ -0.27
CTNS-201ENST00000046640 PCLAFQ15004 111 aa13.38□□□□□ -0.27
CTNS-201ENST00000046640 TRMT5Q32P41 509 aaKnown RBP13.38□□□□□ -0.27
CTNS-201ENST00000046640 EML3Q32P44 896 aa13.38□□□□□ -0.27
CTNS-201ENST00000046640 RAB41Q5JT25 222 aa13.38□□□□□ -0.27
CTNS-201ENST00000046640 MBLAC2Q68D91 279 aa13.38□□□□□ -0.27
CTNS-201ENST00000046640 MYLK4Q86YV6 388 aaPredicted RBP13.38□□□□□ -0.27
CTNS-201ENST00000046640 HPS6Q86YV9 775 aa13.38□□□□□ -0.27
CTNS-201ENST00000046640 TMEM86AQ8N2M4 240 aa13.38□□□□□ -0.27
CTNS-201ENST00000046640 SPATA6LQ8N4H0 392 aa13.38□□□□□ -0.27
CTNS-201ENST00000046640 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.38□□□□□ -0.27
CTNS-201ENST00000046640 MPP6Q9NZW5 540 aa13.38□□□□□ -0.27
CTNS-201ENST00000046640 IGSF9Q9P2J2 1179 aa13.38□□□□□ -0.27
CTNS-201ENST00000046640 NOD1Q9Y239 953 aa13.38□□□□□ -0.27
CTNS-201ENST00000046640 PDCD11Q14690 1871 aaKnown RBP13.37□□□□□ -0.27
CTNS-201ENST00000046640 HOXC8P31273 242 aa13.37□□□□□ -0.27
CTNS-201ENST00000046640 GLRBP48167 497 aa13.37□□□□□ -0.27
CTNS-201ENST00000046640 CUL3Q13618 768 aa13.37□□□□□ -0.27
CTNS-201ENST00000046640 POU6F1Q14863 301 aa13.37□□□□□ -0.27
CTNS-201ENST00000046640 ANKRD20A4Q4UJ75 823 aa13.37□□□□□ -0.27
CTNS-201ENST00000046640 SFT2D3Q587I9 215 aa13.37□□□□□ -0.27
CTNS-201ENST00000046640 CNTD1Q8N815 330 aa13.37□□□□□ -0.27
CTNS-201ENST00000046640 IPMKQ8NFU5 416 aa13.37□□□□□ -0.27
CTNS-201ENST00000046640 ZNF419Q96HQ0 510 aaPredicted RBP13.37□□□□□ -0.27
CTNS-201ENST00000046640 LRRC40Q9H9A6 602 aa13.37□□□□□ -0.27
CTNS-201ENST00000046640 THAP1Q9NVV9 213 aa13.37□□□□□ -0.27
CTNS-201ENST00000046640 SOX13Q9UN79 622 aa13.37□□□□□ -0.27
CTNS-201ENST00000046640 SCN4AP35499 1836 aa13.37□□□□□ -0.27
CTNS-201ENST00000046640 ZCWPW2A0A1B0GU75 182 aa13.37□□□□□ -0.27
CTNS-201ENST00000046640 SNNO75324 88 aaPredicted RBP13.37□□□□□ -0.27
CTNS-201ENST00000046640 PRKCGP05129 697 aa13.37□□□□□ -0.27
CTNS-201ENST00000046640 SERPINA6P08185 405 aa13.37□□□□□ -0.27
CTNS-201ENST00000046640 ODC1P11926 461 aa13.37□□□□□ -0.27
CTNS-201ENST00000046640 GP5P40197 560 aa13.37□□□□□ -0.27
CTNS-201ENST00000046640 FLT3LGP49771 235 aa13.37□□□□□ -0.27
CTNS-201ENST00000046640 DNAL1Q4LDG9 190 aa13.37□□□□□ -0.27
CTNS-201ENST00000046640 TEDDM1Q5T9Z0 273 aa13.37□□□□□ -0.27
CTNS-201ENST00000046640 OVOS1Q6IE37 1185 aa13.37□□□□□ -0.27
CTNS-201ENST00000046640 RNF111Q6ZNA4 994 aa13.37□□□□□ -0.27
CTNS-201ENST00000046640 METTL23Q86XA0 190 aa13.37□□□□□ -0.27
CTNS-201ENST00000046640 DEFB107AQ8IZN7 70 aa13.37□□□□□ -0.27
CTNS-201ENST00000046640 PIWIL2Q8TC59 973 aaKnown RBP13.37□□□□□ -0.27
CTNS-201ENST00000046640 EIF2B3Q9NR50 452 aaKnown RBP13.37□□□□□ -0.27
CTNS-201ENST00000046640 SLC39A10Q9ULF5 831 aa13.37□□□□□ -0.27
CTNS-201ENST00000046640 E9PBE3 544 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 GPR182O15218 404 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 KLHL41O60662 606 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 GLRA3O75311 464 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 ELNP15502 786 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 PEX2P28328 305 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 GSTT1P30711 240 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 CXCR3P49682 368 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 KCNA10Q16322 511 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 SERINC5Q86VE9 423 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 GALNT15Q8N3T1 639 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 NTAN1Q96AB6 310 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 ADAMTS6Q9UKP5 1117 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 GOLGA8QA0A0J9YX86 632 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 GOLGA8OA6NCC3 632 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 GOLGA8NF8WBI6 632 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 PHGDHO43175 533 aaKnown RBP13.36□□□□□ -0.27
CTNS-201ENST00000046640 DCXO43602 365 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 B4GALT3O60512 393 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 SIN3BO75182 1162 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 PMPCBO75439 489 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 CCR10P46092 362 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 GPR15P49685 360 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 AQP4P55087 323 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 ROR2Q01974 943 aaKnown RBP13.36□□□□□ -0.27
CTNS-201ENST00000046640 TRIP10Q15642 601 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 GRAMD1BQ3KR37 738 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 INTS6LQ5JSJ4 861 aaKnown RBP13.36□□□□□ -0.27
CTNS-201ENST00000046640 KYAT3Q6YP21 454 aaKnown RBP13.36□□□□□ -0.27
CTNS-201ENST00000046640 TIFABQ6ZNK6 161 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 KCNMB4Q86W47 210 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 PHTF2Q8N3S3 785 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 SLC9A7Q96T83 725 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 ABI2Q9NYB9 513 aaPredicted RBP13.36□□□□□ -0.27
CTNS-201ENST00000046640 GIT1Q9Y2X7 761 aa13.36□□□□□ -0.27
CTNS-201ENST00000046640 A0A096LPK6 155 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 MANSC4A6NHS7 340 aaPredicted RBP13.35□□□□□ -0.27
CTNS-201ENST00000046640 CCND3P30281 292 aaPredicted RBP13.35□□□□□ -0.27
CTNS-201ENST00000046640 CPOXP36551 454 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 RPS6KA3P51812 740 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 ZNF460Q14592 562 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 NOMO2Q5JPE7 1267 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms