RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 CDH18Q13634 790 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 FAM83EQ2M2I3 478 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 INTS6LQ5JSJ4 861 aaKnown RBP12.27□□□□□ -0.45
CHPF2-201ENST00000035307 TAC4Q86UU9 113 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 TOP6BLQ8N6T0 577 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 ING5Q8WYH8 240 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 SPATA17Q96L03 361 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 HSFY1Q96LI6 401 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 ZNF558Q96NG5 402 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 CSPG4P5Q96PW8 444 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 DDX50Q9BQ39 737 aaKnown RBP12.27□□□□□ -0.45
CHPF2-201ENST00000035307 NMUR2Q9GZQ4 415 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 CATSPERBQ9H7T0 1116 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 GPAMQ9HCL2 828 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 SPATS2LQ9NUQ6 558 aaKnown RBP12.27□□□□□ -0.45
CHPF2-201ENST00000035307 ARL8BQ9NVJ2 186 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 DSEQ9UL01 958 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 FAM155AB1AL88 458 aaPredicted RBP12.27□□□□□ -0.45
CHPF2-201ENST00000035307 XPO1O14980 1071 aaKnown RBP12.27□□□□□ -0.45
CHPF2-201ENST00000035307 GP5P40197 560 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 PGGT1BP53609 377 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 PDPK2PQ6A1A2 396 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 IZUMO2Q6UXV1 221 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 NECAB2Q7Z6G3 386 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 LDB1Q86U70 411 aaPredicted RBP12.27□□□□□ -0.45
CHPF2-201ENST00000035307 ST13P4Q8IZP2 240 aaPredicted RBP12.27□□□□□ -0.45
CHPF2-201ENST00000035307 MPP5Q8N3R9 675 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 SNX31Q8N9S9 440 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 TDRD5Q8NAT2 981 aaKnown RBP12.27□□□□□ -0.45
CHPF2-201ENST00000035307 DQX1Q8TE96 717 aaKnown RBP12.27□□□□□ -0.45
CHPF2-201ENST00000035307 ABTB1Q969K4 478 aaPredicted RBP12.27□□□□□ -0.45
CHPF2-201ENST00000035307 EME1Q96AY2 570 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 NAF1Q96HR8 494 aaKnown RBP12.27□□□□□ -0.45
CHPF2-201ENST00000035307 KCTD15Q96SI1 283 aaPredicted RBP12.27□□□□□ -0.45
CHPF2-201ENST00000035307 EFHD1Q9BUP0 239 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 ZNF358Q9NW07 568 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 CNTN3Q9P232 1028 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 ACOT9Q9Y305 439 aa12.27□□□□□ -0.45
CHPF2-201ENST00000035307 A0A0A0MRY4 1105 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 RBM47A0AV96 593 aaKnown RBP12.26□□□□□ -0.45
CHPF2-201ENST00000035307 MBLAC1A4D2B0 266 aaPredicted RBP12.26□□□□□ -0.45
CHPF2-201ENST00000035307 AKAP10O43572 662 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 EDF1O60869 148 aaKnown RBP12.26□□□□□ -0.45
CHPF2-201ENST00000035307 ADAMTS4O75173 837 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 FLOT2Q14254 428 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 NOMO1Q15155 1222 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 DLG2Q15700 870 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 SPRED3Q2MJR0 410 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 OTOP3Q7RTS5 596 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 LRRTM3Q86VH5 581 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 NAT16Q8N8M0 369 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.26□□□□□ -0.45
CHPF2-201ENST00000035307 MFSD3Q96ES6 412 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 SPATA13Q96N96 652 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 LHX5Q9H2C1 402 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 PPCSQ9HAB8 311 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 PNPOQ9NVS9 261 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 CDYLQ9Y232 598 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 BRWD1Q9NSI6 2320 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 ENPP3O14638 875 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 PAGE1O75459 146 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 RHOBTB1O94844 696 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 METTL18O95568 372 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 CXCL14O95715 111 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 RPL9P32969 192 aaKnown RBP12.26□□□□□ -0.45
CHPF2-201ENST00000035307 HDAC4P56524 1084 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 DNAL1Q4LDG9 190 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 CYP2R1Q6VVX0 501 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 SPATA22Q8NHS9 363 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 CENPTQ96BT3 561 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 CMTM5Q96DZ9 223 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 SERAC1Q96JX3 654 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 BCO2Q9BYV7 579 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 CIPCQ9C0C6 399 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 SMAPO00193 183 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 AMHP03971 560 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 ADRA1BP35368 520 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 CAP1Q01518 475 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 UGP2Q16851 508 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 SPDYAQ5MJ70 313 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 IYDQ6PHW0 289 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 LINGO4Q6UY18 593 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 KHSRPQ92945 711 aaKnown RBP eCLIP12.26□□□□□ -0.451e-22■□□□□ 8.8
CHPF2-201ENST00000035307 VPS28Q9UK41 221 aa12.26□□□□□ -0.45
CHPF2-201ENST00000035307 F5H5T6 163 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 ABLIM1O14639 778 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 HDCP19113 662 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 CALB2P22676 271 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 EPHA3P29320 983 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 SZRD1Q7Z422 152 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 ANKS1BQ7Z6G8 1248 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 DDX53Q86TM3 631 aaKnown RBP12.25□□□□□ -0.45
CHPF2-201ENST00000035307 SLC41A1Q8IVJ1 513 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 KBTBD7Q8WVZ9 684 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 TUBGCP3Q96CW5 907 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 EBNA1BP2Q99848 306 aaKnown RBP12.25□□□□□ -0.45
CHPF2-201ENST00000035307 TLR8Q9NR97 1041 aaKnown RBP12.25□□□□□ -0.45
CHPF2-201ENST00000035307 CCDC167Q9P0B6 97 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 MOSPD1Q9UJG1 213 aa12.25□□□□□ -0.45
CHPF2-201ENST00000035307 BAG5Q9UL15 447 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms