RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Tmed5Q9CXE7 229 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 GatmQ9D964 423 aaKnown RBP14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Ccdc103Q9D9P2 237 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 PignQ9R1S3 931 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Hao1Q9WU19 370 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Rfc2Q9WUK4 349 aaKnown RBP14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Asb1Q9WV74 336 aa14.6□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Zfp758E9QAA1 583 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 FaahO08914 579 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Cer1O55233 272 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Psma3O70435 255 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Hsd17b7O88736 334 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 PrnpP04925 254 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Htr2cP34968 459 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Gabpb1Q00420 383 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 SnrpaQ62189 287 aaKnown RBP14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Rassf6Q80UQ2 353 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Trnau1apQ80VC6 287 aaKnown RBP14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Q8BGA7 448 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Trpa1Q8BLA8 1125 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Usp43Q8BUM9 1132 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Pdcd2lQ8C5N5 364 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Nlrp4bQ8C6J9 863 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Atg14Q8CDJ3 492 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Q8CDN1 933 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Acsl5Q8JZR0 683 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Zbtb44Q8R0A2 453 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Grk2Q99MK8 689 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Polr3cQ9D483 533 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Ubqln5Q9D4I8 510 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Subh2bvQ9D9Z7 123 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Dpysl5Q9EQF6 564 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Tlr9Q9EQU3 1032 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Noa1Q9JJG9 693 aaKnown RBP14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 IkbkeQ9R0T8 717 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Stk11Q9WTK7 436 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Plxna4Q80UG2 1893 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Ighv11-2A0A075B5R8 117 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Zfp626A0A0U1RQ84 676 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Man2b1O09159 1013 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Fgf10O35565 209 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 PigrO70570 771 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Adamts8P57110 905 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Cntn3Q07409 1028 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 DselQ0VBN2 1207 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Ccdc138Q0VF22 680 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Glt6d1Q2NKH9 311 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Pdss1Q33DR2 409 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Pyroxd1Q3TMV7 498 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Alkbh5Q3TSG4 395 aaKnown RBP14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Enpp3Q6DYE8 874 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Cand1Q6ZQ38 1230 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Olfr299Q7TS05 330 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Ankzf1Q80UU1 748 aaKnown RBP14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Afap1l1Q8BZI0 768 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Dcun1d2Q8BZJ7 259 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Nlrp10Q8CCN1 673 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Ifi205aQ8CGE8 404 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 PygbQ8CI94 843 aaKnown RBP14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Trim68Q8K243 485 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Aco2Q99KI0 780 aaKnown RBP14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Reep3Q99KK1 254 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Mrps17Q9CQE3 120 aaKnown RBP14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Chchd3Q9CRB9 227 aaKnown RBP14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Mxra7Q9CZH7 178 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Nt5c3aQ9D020 331 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 LrgukQ9D5S7 820 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 PgcQ9D7R7 392 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Cog8Q9JJA2 640 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 PodxlQ9R0M4 503 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Adam17Q9Z0F8 827 aa14.59□□□□□ -0.07
Ssr1-204ENSMUST00000225319 Znf518bB2RRE4 1077 aa14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 Smok3aC0HKC8 504 aa14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 Smok3bC0HKC9 504 aa14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 Kctd18E0CZ26 429 aa14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 Spin2fJ3QPU0 254 aa14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 Il3P01586 166 aa14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 UmpsP13439 481 aaKnown RBP14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 Slc6a13P31649 602 aa14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 Ptger1P35375 405 aa14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 Pdcd2P46718 343 aa14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 Timm13P62075 95 aa14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 Grb7Q03160 535 aa14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 H2-Q2Q4KN81 360 aa14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 Fbxo39Q5NBU5 443 aa14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 Nfe2l2Q60795 597 aa14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 Slc6a4Q60857 630 aa14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 Ino80dQ66JY2 873 aaKnown RBP14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 Xylt1Q811B1 953 aa14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 Arfip2Q8K221 341 aa14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 Cox18Q8VC74 331 aa14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 Stx18Q8VDS8 334 aa14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 Atpaf2Q91YY4 289 aa14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 TfQ921I1 697 aa14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 NonoQ99K48 473 aaKnown RBP14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 Klhdc8bQ9D2D9 354 aa14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 Gucy1a3Q9ERL9 691 aa14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 PtprdQ64487 1912 aa14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 Nup210Q9QY81 1886 aaKnown RBP14.58□□□□□ -0.08
Ssr1-204ENSMUST00000225319 Tex13c2A0A0G2JGA3 530 aa14.57□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 65.3 ms