RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Klhdc7bA0A286YD60 1263 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Sp1O89090 784 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Gm5571P01639 130 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Tcf3P15806 651 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 CremP27699 357 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Stmn4P63042 189 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Zbtb14Q08376 449 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Gpr65Q61038 337 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Lcp1Q61233 627 aaKnown RBP21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Maml1Q6T264 1020 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Stambpl1Q76N33 436 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Q80WR5 230 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Ubr7Q8BU04 425 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Trerf1Q8BXJ2 1205 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Arhgap12Q8C0D4 838 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Gbp5Q8CFB4 590 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Sec14l2Q99J08 403 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Foxp3Q99JB6 429 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Q9D937 123 aaKnown RBP21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Nkx2-4Q9EQM3 354 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 DonsonQ9QXP4 560 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Gm29133A0A1B0GT72 266 aa21.59■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Kcnk16G5E845 292 aa21.59■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Usp35M0QWN7 1009 aa21.59■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Prkag1O54950 330 aa21.59■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Ap2a1P17426 977 aaKnown RBP21.59■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 DesP31001 469 aaKnown RBP21.59■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 1700061G19RikQ08EE8 705 aa21.59■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Srbd1Q497V5 1015 aaKnown RBP21.59■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Afap1l2Q5DTU0 825 aa21.59■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 MlipQ5FW52 269 aa21.59■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Gngt1Q61012 74 aa21.59■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Tpp2Q64514 1262 aa21.59■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Olfr698Q7TRN4 311 aa21.59■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Olfr213Q7TS32 327 aa21.59■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Rccd1Q8BTU7 377 aa21.59■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Sit1Q8C503 180 aa21.59■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Zfp62Q8C827 914 aa21.59■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 LipmQ8K2A6 422 aa21.59■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 RhoqQ8R527 205 aa21.59■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Mat2bQ99LB6 334 aa21.59■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Ndufa10Q99LC3 355 aaKnown RBP21.59■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Fzd2Q9JIP6 570 aa21.59■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Ppp2r3cQ9JK24 453 aa21.59■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Gm5689F6Y2A6 97 aa21.58■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 ChkaO54804 453 aa21.58■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Entpd2O55026 495 aa21.58■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Wnt3aP27467 352 aa21.58■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 MagohP61327 146 aaKnown RBP21.58■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Rps24P62849 133 aaKnown RBP21.58■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 IqcmQ149I8 489 aa21.58■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Pgap2Q3TQR0 254 aa21.58■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Serpinb6dQ3UWK8 375 aa21.58■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Pwwp2aQ69Z61 730 aa21.58■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Ggnbp1Q6K1E7 370 aa21.58■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Cdc14bQ6PFY9 485 aa21.58■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Gpr62Q80UC6 358 aa21.58■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Rbm22Q8BHS3 420 aaKnown RBP21.58■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Lancl3Q8CD19 420 aa21.58■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Atg13Q91YI1 516 aa21.58■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Cyp4f13Q99N19 523 aa21.58■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 MagohbQ9CQL1 146 aa21.58■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Il1rl2Q9ERS7 574 aa21.58■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Krt71Q9R0H5 524 aa21.58■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 TrioQ0KL02 3102 aa21.58■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Igkv10-94A0A075B5L1 115 aa21.58■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 JundP15066 341 aa21.58■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 CstaP56567 97 aa21.58■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Sco1Q5SUC9 284 aa21.58■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 HnrnpdQ60668 355 aaKnown RBP21.58■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 NfascQ810U3 1240 aa21.58■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Psapl1Q8C1C1 522 aa21.58■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Q8CC96 669 aa21.58■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Fcho1Q8K285 873 aa21.58■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 SardhQ99LB7 919 aa21.58■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Tmem135Q9CYV5 458 aa21.58■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Cacng3Q9JJV5 315 aa21.58■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 C1qtnf1Q9QXP7 281 aa21.58■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Gm20431E9PY39 371 aa21.57■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Vmn2r86G5E8Y4 848 aa21.57■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Vmn2r70K7N702 854 aa21.57■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Ctbp1O88712 441 aa21.57■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Dbx1P52950 335 aa21.57■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Pnpla8Q8K1N1 776 aa21.57■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Cadm1Q8R5M8 456 aaKnown RBP21.57■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Yaf2Q99LW6 179 aa21.57■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Nop56Q9D6Z1 580 aaKnown RBP21.57■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Irx5Q9JKQ4 484 aa21.57■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Mpp5Q9JLB2 675 aa21.57■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Fibcd1A2AV25 459 aa21.56■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 PfklP12382 780 aa21.56■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Gdf5P43027 495 aa21.56■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 MipP51180 263 aa21.56■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Zfp217Q3U0X6 1041 aa21.56■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Lmf1Q3U3R4 574 aa21.56■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Foxred2Q3USW5 665 aa21.56■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Hepacam2Q4VAH7 463 aa21.56■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 C1qtnf6Q6IR41 264 aa21.56■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Kansl1Q80TG1 1036 aaKnown RBP21.56■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Zmpste24Q80W54 475 aa21.56■■□□□ 1.04
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms