RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Gm12394A2AKP6 982 aa7.53□□□□□ -1.2
Ccdc54-201ENSMUST00000062439 Obox6G3X9U1 347 aa7.53□□□□□ -1.2
Ccdc54-201ENSMUST00000062439 H2-AaP01910 256 aa7.53□□□□□ -1.2
Ccdc54-201ENSMUST00000062439 Prkar2bP31324 416 aa7.53□□□□□ -1.2
Ccdc54-201ENSMUST00000062439 Wdr5P61965 334 aa7.53□□□□□ -1.2
Ccdc54-201ENSMUST00000062439 Zfp386Q1WWJ5 626 aa7.53□□□□□ -1.2
Ccdc54-201ENSMUST00000062439 Pak6Q3ULB5 682 aa7.53□□□□□ -1.2
Ccdc54-201ENSMUST00000062439 Kcnk18Q6VV64 394 aa7.53□□□□□ -1.2
Ccdc54-201ENSMUST00000062439 Gm26558Q8BLW8 286 aa7.53□□□□□ -1.2
Ccdc54-201ENSMUST00000062439 Olfr836Q8VFJ3 317 aa7.53□□□□□ -1.2
Ccdc54-201ENSMUST00000062439 Mrpl12Q9DB15 201 aaKnown RBP7.53□□□□□ -1.2
Ccdc54-201ENSMUST00000062439 Cyp4v2Q9DBW0 525 aa7.53□□□□□ -1.2
Ccdc54-201ENSMUST00000062439 Ulk2Q9QY01 1037 aa7.53□□□□□ -1.2
Ccdc54-201ENSMUST00000062439 HnrnpcQ9Z204 313 aaKnown RBP7.53□□□□□ -1.2
Ccdc54-201ENSMUST00000062439 Polr2aP08775 1970 aaKnown RBP7.53□□□□□ -1.2
Ccdc54-201ENSMUST00000062439 Zscan4eA0A1B0GRE8 505 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Zmynd12A2BGJ5 363 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Zscan4bE9Q3G0 505 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Gm13128L7MU96 475 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Psmd14O35593 310 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Sult6b1P0CC03 303 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Casp1P29452 402 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Kcnj12P52187 427 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Sirt6P59941 334 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Atp8a2P98200 1148 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Znf800Q0VEE6 662 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Ccbe1Q3MI99 408 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Plekhf1Q3TB82 279 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 LcorlQ3U285 600 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Ccdc51Q3URS9 406 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Sdr39u1Q5M8N4 308 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Grm6Q5NCH9 871 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Agtpbp1Q641K1 1218 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Gm21985Q6P6P5 1106 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Arrdc3Q7TPQ9 414 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Actr5Q80US4 605 aaKnown RBP7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Fam110dQ80X91 271 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Zkscan8Q8BSL0 588 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Znf451Q8C0P7 1056 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Fam46bQ8C152 427 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Cpne5Q8JZW4 593 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Plbd1Q8VCI0 550 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Aim2Q91VJ1 354 aaKnown RBP7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Ciao1Q99KN2 339 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 AticQ9CWJ9 592 aaKnown RBP7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Susd2Q9DBX3 820 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Rcan3Q9JKK0 239 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Sytl4Q9R0Q1 673 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Kdm3aQ6PCM1 1323 aa7.52□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Gm7356A0A087WSA6 508 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Akap17bA2A3V1 959 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Ldlrad3A2AR95 345 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Fam47eD3YWC7 402 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Triml2E9PW10 424 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Zfp867E9Q2M4 473 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Cacna2d1O08532 1103 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Hes2O54792 157 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Pa2g4P50580 394 aaKnown RBP7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Rps12P63323 132 aaKnown RBP7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Terf1P70371 421 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 NyxP83503 476 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Adra1bP97717 514 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Dlk1Q09163 385 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 GmpsQ3THK7 693 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Cwc27Q3TKY6 469 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Snx25Q3ZT31 840 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Atg9aQ68FE2 551 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 SepsecsQ6P6M7 504 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Vstm2lQ6PDS0 220 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 NfrkbQ6PIJ4 1296 aaKnown RBP7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Rab3gap1Q80UJ7 981 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Ehd2Q8BH64 543 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 DglucyQ8BH86 617 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Eda2rQ8BX35 297 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 SpartQ8R1X6 671 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 ClyblQ8R4N0 338 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Vsx1Q91V10 363 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Coa7Q921H9 231 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Glrx3Q9CQM9 337 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Chmp4bQ9D8B3 224 aaKnown RBP7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 ParvgQ9ERD8 331 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 LratQ9JI60 231 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 LitafQ9JLJ0 161 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 HnrnpfQ9Z2X1 415 aaKnown RBP7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Homer1Q9Z2Y3 366 aa7.51□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Prob1A0A087WR45 1010 aa7.5□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 LexmA2AVQ5 414 aa7.5□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Vmn2r96E9PZU5 664 aa7.5□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Gm15319E9Q637 350 aa7.5□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Il20rbE9Q9A6 308 aa7.5□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Speer4dL7N216 212 aa7.5□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Suv39h1O54864 412 aa7.5□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Cdc6O89033 562 aaKnown RBP7.5□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Abcb1bP06795 1276 aa7.5□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Camk4P08414 469 aa7.5□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Ppp3cbP48453 525 aa7.5□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Mdga2P60755 949 aa7.5□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Gfra1P97785 468 aa7.5□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Pdcd1Q02242 288 aa7.5□□□□□ -1.21
Ccdc54-201ENSMUST00000062439 Caprin2Q05A80 1031 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms