RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Htr2cP34968 459 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Elk4P41158 430 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 PgfP49764 158 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ldb1P70662 411 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Skiv2lQ6NZR5 1244 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Olfr533Q7TRT7 320 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Mettl21cQ8BLU2 248 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ano4Q8C5H1 955 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Adgrg2Q8CJ12 1009 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Mkl1Q8K4J6 964 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Dcun1d1Q9QZ73 259 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Cdh13Q9WTR5 714 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Zbed5B2RPU8 756 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Vmn2r70K7N702 854 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Lamp1P11438 406 aaKnown RBP9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Mmp3P28862 477 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Pcsk1P63239 753 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Muc1Q02496 630 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Pecam1Q08481 727 aaKnown RBP9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Meaf6Q2VPQ9 191 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Armcx5Q3UZB0 606 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Slc22a16Q497L8 649 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Arhgap1Q5FWK3 439 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 UrgcpQ5NCI0 926 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Mib1Q80SY4 1006 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Scara3Q8C850 606 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Mrps17Q9CQE3 120 aaKnown RBP9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Lsm12Q9D0R8 195 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ddit4Q9D3F7 229 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Syde1Q9DBZ9 737 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Rgs3Q9DC04 966 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Nupr1Q9WTK0 80 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Aqp5Q9WTY4 265 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Arid3bQ9Z1N7 568 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 C87414E9PWI7 475 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Olfr726E9Q8X3 321 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Hs3st1O35310 311 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Syngr1O55100 234 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Slc2a4P14142 509 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Olfr725Q05A45 321 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Tmem45aQ60774 273 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 PhgdhQ61753 533 aaKnown RBP9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gpsm1Q6IR34 673 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Olfr297Q7TS07 310 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Bmp3Q8BHE5 468 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Rwdd4Q9CPR1 188 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ifrd2Q9D8U0 441 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Plin3Q9DBG5 437 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ddx59Q9DBN9 619 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 MecrQ9DCS3 373 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Morc1Q9WVL5 950 aa9.88□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Fndc3c1Q6DFV6 1356 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Dock2Q8C3J5 1828 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Grik3B1AS29 919 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Pex10B1AUE5 324 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ssxb8B1AY40 170 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Olfr220E9Q050 325 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Zscan4bE9Q3G0 505 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gm7942L7N277 499 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Kng1O08677 661 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ctnnd2O35927 1247 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Pde9aO70628 534 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Asgr1P34927 284 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Aqp1Q02013 269 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Thrap3Q569Z6 951 aaKnown RBP9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Grid2Q61625 1007 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Zdhhc17Q80TN5 632 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Eif4bQ8BGD9 611 aaKnown RBP9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Fbxw21Q8BI38 468 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Anapc2Q8BZQ7 837 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 SmtnQ921U8 923 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 AadacQ99PG0 398 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Zmat2Q9CPW7 199 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 DtnaQ9D2N4 746 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Fam122aQ9DB52 284 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Cdh22Q9WTP5 813 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Zscan12Q9Z1D7 501 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gm5751A2AHC8 147 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Srp72F8VQC1 671 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gm10721J3QPJ9 223 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ctbp1O88712 441 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 CcnoP0C242 352 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Cdk7Q03147 346 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Mpzl3Q3V3F6 237 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Itga1Q3V3R4 1179 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Srek1ip1Q4V9W2 153 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Q5XFZ0 217 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 CybbQ61093 570 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Abcd2Q61285 741 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Creb3Q61817 404 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Slc39a14Q75N73 489 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Nox1Q8CIZ9 591 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Sorcs3Q8VI51 1219 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Fam192aQ91WE2 254 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Crtc3Q91X84 619 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Smim11aQ99J19 55 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Sytl2Q99N50 950 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Lyrm1Q9CQB7 122 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Snx2Q9CWK8 519 aa9.87□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Rin2Q9D684 903 aa9.87□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms