RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Fem1aaQ9Z2G1 654 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gria4Q9Z2W8 902 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm21936A0A1Y7VJE9 144 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm5788A0A1Y7VK80 144 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Rhox1B1APN4 224 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Nxpe3B9EKK6 559 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm5039J3QNT6 144 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm2035J3QP87 144 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Smad6O35182 495 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Abi2P62484 446 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm2016Q3TQZ4 144 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 CblbQ3TTA7 982 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm8332Q3UTA4 144 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gja3Q64448 417 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Rftn1Q6A0D4 554 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Svs1Q6WIZ7 820 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Rnf144bQ8BKD6 301 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm5662Q8BX20 144 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Rgs8Q8BXT1 180 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Tmx3Q8BXZ1 456 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 4932411N23RikQ8C0S0 470 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 1700020N01RikQ8CF20 87 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Hoxc12Q8K5B8 280 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Mtmr4Q91XS1 1190 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 PpanQ91YU8 470 aaKnown RBP9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Kcnh5Q920E3 988 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Psat1Q99K85 370 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Pbdc1Q9D0B6 198 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Vmn1r41Q9EQ44 310 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Nek6Q9ES70 313 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Hey2Q9QUS4 339 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 A0A1Y7VIU7 259 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Cyp2b13A6H6J2 491 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Scgb2b7D3YYY1 112 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm37240E9QAY5 252 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Mmp8O70138 465 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 TP20293 436 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 F2rP30558 430 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Rpl10aP53026 217 aaKnown RBP9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Serping1P97290 504 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 HmgcrQ01237 887 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Ankrd27Q3UMR0 1048 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Akap14Q3V0I7 536 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 CslQ80X68 466 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Rnf24Q8BGI1 148 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Nup54Q8BTS4 510 aaKnown RBP9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Slc9a4Q8BUE1 797 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Btbd7Q8CFE5 1130 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Il23rQ8K4B4 644 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 DolkQ8R2Y3 534 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Dnajc17Q91WT4 303 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 TpbpbQ9CQC0 121 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Mlf1Q9QWV4 267 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Zscan12Q9Z1D7 501 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Mtmr9Q9Z2D0 545 aa9.09□□□□□ -0.95
Clcn3-202ENSMUST00000056508 Gm21885A0A286YDN8 145 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Usp51B1AY15 661 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 2010300C02RikE9Q3M9 1175 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Gm6482F6YHC1 213 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Orm2P07361 207 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Nedd1P33215 660 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 AhcyP50247 432 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Rps12P63323 132 aaKnown RBP9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 SmsP97355 366 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Rmdn3Q3UJU9 470 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 ParpbpQ6IRT3 573 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ube3cQ80U95 1083 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Sh2d7Q8BI17 458 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Mamdc2Q8CG85 686 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 BtdQ8CIF4 520 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Bbs7Q8K2G4 715 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Kiaa0513Q8R0A7 407 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Zdhhc12Q8VC90 267 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ddx1Q91VR5 740 aaKnown RBP9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Adgre4Q91ZE5 689 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Rad18Q9QXK2 509 aaKnown RBP9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ddi2A2ADY9 399 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Gprin2D3Z1D7 455 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Slc18a3O35304 530 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 CcnoP0C242 352 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Mmp12P34960 473 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Anxa5P48036 319 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ppp3cbP48453 525 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Rab2aP53994 212 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Arid5aQ3U108 590 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Mex3dQ3UE17 643 aaKnown RBP9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Nr0b1Q61066 472 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Plcxd3Q8BLJ3 321 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Smco3Q8BQM7 225 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Prkaa2Q8BRK8 552 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 FgbQ8K0E8 481 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Esrp2Q8K0G8 717 aaKnown RBP9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Stap2Q8R0L1 411 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Thoc3Q8VE80 351 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Ces1fQ91WU0 561 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Rab28Q99KL7 221 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Clcc1Q99LI2 539 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Adgrf4Q9D2L6 698 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Q9D5Y0 588 aa9.08□□□□□ -0.96
Clcn3-202ENSMUST00000056508 Vmn2r121A2BE32 847 aa9.08□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms