RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Mageb18Q8BQR7 327 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Gpr158Q8C419 1200 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Zfp449Q8CB76 518 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 HpdlQ8K248 371 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Olfr45Q8VGM1 311 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Dpp3Q99KK7 738 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Tmed10Q9D1D4 219 aaKnown RBP7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Tsga13Q9DA17 273 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Smad9Q9JIW5 430 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Pi4kaE9Q3L2 2105 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Igkv16-104A0A0B4J1I1 116 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Cfap221A9Q751 836 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Lipo2D3YY49 398 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Olfr694K7N641 315 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Slc22a2O70577 553 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Alox15P39654 663 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Psma2P49722 234 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Flt3lgP49772 232 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 GckP52792 465 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 MagohP61327 146 aaKnown RBP7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 AxlQ00993 888 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ttc39dQ0VF76 604 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Fam171bQ14CH0 825 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Klra5Q60652 266 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 ManeaQ6NXH2 462 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ppfia2Q8BSS9 1257 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Cwf19l1Q8CI33 537 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Scamp1Q8K021 338 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Pcdhb1Q91Y08 818 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Rwdd4Q9CPR1 188 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 MagohbQ9CQL1 146 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Wars2Q9CYK1 360 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Lmx1aQ9JKU8 382 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 RhoaQ9QUI0 193 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Mapk9Q9WTU6 423 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 PapolbQ9WVP6 641 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ggt5Q9Z2A9 573 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Gm28360A0A087WR25 190 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Gm6370A0A0G2JGX9 315 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Vmn2r27D3YUK6 857 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 D3Z070 196 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Gm6309L7N481 315 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ercc2O08811 760 aaKnown RBP7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Myo1aO88329 1043 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Cdh1P09803 884 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Rc3h2P0C090 1187 aaKnown RBP7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Uba1yP31254 1058 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Gpr3P35413 330 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 CenpcP49452 906 aaKnown RBP7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 EsrrgP62509 458 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 SbdsP70122 250 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 IhhP97812 411 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 CamkmtQ3U2J5 323 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Zdhhc17Q80TN5 632 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Il33Q8BVZ5 266 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Kdm1bQ8CIG3 826 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 OafQ8QZR4 282 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ace2Q8R0I0 805 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Calhm5Q8R100 309 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Nup58Q8R332 587 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Slco3a1Q8R3L5 710 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Taf11Q99JX1 211 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Cyb561d2Q9WUE3 222 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Atp8b4A2ANX3 1194 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Gm44G3UW88 330 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Zbtb11G5E8B9 1050 aaKnown RBP7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Vmn2r54K7N649 806 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Opn1mwO35599 359 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Adam19O35674 920 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 HmbsP22907 361 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Vav1P27870 845 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Gspt2Q149F3 632 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 G2e3Q5RJY2 716 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Q6PD19 689 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 TwistnbQ78WZ7 330 aaKnown RBP7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Tas2r129Q7M709 320 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Thop1Q8C1A5 687 aaKnown RBP7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Gramd1aQ8VEF1 722 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Syt12Q920N7 421 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 PawrQ925B0 333 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Zmynd10Q99ML0 440 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Rpn2Q9DBG6 631 aaKnown RBP7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 TriobpQ99KW3 2014 aa7.03□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Nup62clA2AG10 272 aa7.02□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Gm13101A2ASJ0 481 aa7.02□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Fam171a1A2ATK9 892 aa7.02□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Ssxb9A2BI93 185 aa7.02□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Lrriq4A6H6A4 596 aa7.02□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Gm8108K7N734 216 aa7.02□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Mcpt2P15119 244 aa7.02□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Npr1P18293 1057 aa7.02□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Pold1P52431 1105 aa7.02□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Rab33aP97950 237 aa7.02□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Trappc9Q3U0M1 1148 aa7.02□□□□□ -1.29
Bdnf-201ENSMUST00000053317 LpoQ5SW46 710 aa7.02□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Dsg1bQ7TSF1 1060 aa7.02□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Ccdc50Q810U5 305 aaKnown RBP7.02□□□□□ -1.29
Bdnf-201ENSMUST00000053317 AgmoQ8BS35 447 aa7.02□□□□□ -1.29
Bdnf-201ENSMUST00000053317 Parp10Q8CIE4 960 aa7.02□□□□□ -1.29
Bdnf-201ENSMUST00000053317 HibchQ8QZS1 385 aa7.02□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms