RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Ptpn7Q8BUM3 359 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Tbc1d14Q8CGA2 694 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Klrb1fQ8VD98 217 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Gadd45gip1Q9CR59 222 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Gon7P0C8B4 98 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Tuba4aP68368 448 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 GskipQ8BGR8 139 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Zfp61Q923D1 555 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Olig1Q9JKN5 260 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Gm7694J3QNH8 270 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 OsmrO70458 971 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Morf4l1P60762 362 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Mks1Q5SW45 561 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Gemin8Q8BHE1 238 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Gpc1Q9QZF2 557 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Tas2r104Q7M723 302 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Rasgrp2Q9QUG9 608 aa16.82■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Tll1Q62381 1013 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 AY358078Q6UY53 465 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Akr1c21Q91WR5 323 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Adgra3Q7TT36 1310 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Smok3cA0A087WSF2 504 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Spata6lB2RV46 347 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Cyp2c68K7N6C2 491 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Tp53i13Q5F267 385 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Gcnt3Q5JCT0 437 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Stard3Q61542 446 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Siah3B2RWG3 268 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Smim22J3QP37 91 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Chst3O88199 472 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Rin2Q9D684 903 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Vps35Q9EQH3 796 aaKnown RBP16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Pon1P52430 355 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Dnajc11Q5U458 559 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Znf622Q91VY9 476 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Prl7c1Q9CRB5 251 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 2010005H15RikQ9D8D6 97 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Larp4bQ6A0A2 741 aaKnown RBP16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Pnpla8Q8K1N1 776 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Olfr600E9PUN7 314 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Aldh1a7O35945 501 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Itgb3O54890 787 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Aldh1a1P24549 501 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Taf13P61216 124 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 CrtamQ149L7 389 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Fam131bQ3TY60 332 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Gpsm1Q6IR34 673 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 SugctQ7TNE1 436 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 C1qtnf7Q8BVD7 289 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Aspscr1Q8VBT9 550 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Cd151O35566 253 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Ppp4cP97470 307 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Znf112Q0VAW7 879 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Aars2Q14CH7 980 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Olfr695Q8VFM3 315 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Ern1Q9EQY0 977 aa16.81■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Fgf10O35565 209 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Rpl22P67984 128 aaKnown RBP16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Zbtb14Q08376 449 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Q8BGK9 164 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Olfr541Q8VGM0 312 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Vmn2r29L7N2D4 852 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 EpoP07321 192 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Cdh6P97326 790 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Ccdc69Q3TCJ8 202 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Ppwd1Q8CEC6 646 aaKnown RBP16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Prpf19Q99KP6 504 aaKnown RBP16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Mcm8Q9CWV1 833 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 H2bfmQ9DAB5 224 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Klhl3E0CZ16 587 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Fads2p1Q0VAX3 487 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Arhgap22Q8BL80 702 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Gm3752A6NAT4 150 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Wdr72D3YYM4 1114 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Rnf113a2Q14B01 337 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Rassf5Q5EBH1 413 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 PnmtP40935 295 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Mtf2Q02395 593 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Kctd8Q50H33 476 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Parp6Q6P6P7 630 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Zbtb33Q8BN78 671 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Fndc1E9Q043 1732 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Fndc11Q80WB0 326 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Ap3s2Q8BSZ2 193 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Vmn2r55G3UWZ4 781 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Vmn2r53L7N473 806 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 H2-AaP01910 256 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Cdh4P39038 913 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Grk1Q9WVL4 564 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Chd3B1AR17 2055 aa16.8■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Rdh7O88451 316 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Thoc7Q7TMY4 204 aaKnown RBP16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Vps26bQ8C0E2 336 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Shank2Q80Z38 1476 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Ect2lA0A140LIP2 953 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Cyp2t4E9PWV0 503 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Arhgef38Q80VK6 770 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Epc2Q8C0I4 808 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Samd4aQ8CBY1 711 aaKnown RBP16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Cyp2c55Q9D816 490 aa16.79■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms