RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Rbbp7Q60973 425 aaKnown RBP4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Ces3aQ63880 571 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 AY358078Q6UY53 465 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Znf618Q80YY7 953 aaKnown RBP4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Gjd3Q91YD1 278 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Ubxn2aQ99KJ0 258 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Cyp4f16Q99N17 524 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Rsph14Q9D3W1 341 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Chit1Q9D7Q1 464 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Rpl9-ps1S4R1R7 191 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Olfr1145A2AVC7 325 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Slfn9B1ARD6 910 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Smok3aC0HKC8 504 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Smok3bC0HKC9 504 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Serpine3E9Q6A2 401 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Esp34G3UXG0 151 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Sult3a2G5E904 293 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Clk3O35492 638 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Pon1P52430 355 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Larp7Q05CL8 570 aaKnown RBP4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 GsapQ3TCV3 858 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Mief2Q5NCS9 454 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Znf280dQ68FE8 974 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Nudt16Q6P3D0 195 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 BC061212Q6P8K3 481 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Samd3Q8C4H2 520 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 OafQ8QZR4 282 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Chmp1b1Q99LU0 199 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Mri1Q9CQT1 369 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Bbs2Q9CWF6 721 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 CygbQ9CX80 190 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Stk25Q9Z2W1 426 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Plch1Q4KWH5 1682 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Mtnd2P03893 345 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Aldh1a1P24549 501 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 PlaaP27612 794 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 PkmP52480 531 aaKnown RBP4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Exoc3l1Q8BI71 739 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Mapkap1Q8BKH7 522 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 KyQ8C8H8 661 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Pitrm1Q8K411 1036 aaKnown RBP4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Ccdc58Q8R3Q6 144 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Snx9Q91VH2 595 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Grin3bQ91ZU9 1003 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Ndufa10Q99LC3 355 aaKnown RBP4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Gadd45gip1Q9CR59 222 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Ints11Q9CWS4 600 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Oma1Q9D8H7 521 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Dusp21Q9D9D8 189 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Tlr9Q9EQU3 1032 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Rgs1Q9JL25 209 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Ak1Q9R0Y5 194 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Zmynd12A2BGJ5 363 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Foxm1O08696 760 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Mfsd14aP70187 490 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Sfmbt2Q5DTW2 938 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Myl12aQ6ZWQ9 172 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Zswim5Q80TC6 1188 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Znf467Q8JZL0 594 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Ttc36Q8VBW8 186 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Gpn2Q8VEJ1 310 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Fam227bQ9D518 532 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Smarcb1Q9Z0H3 385 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Dpp6Q9Z218 804 aa4.63□□□□□ -1.67
Prkdc-201ENSMUST00000023352 SmgcF6VRN1 385 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Sdc4O35988 198 aaKnown RBP4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 CrymO54983 313 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 PrkceP16054 737 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Eif3eP60229 445 aaKnown RBP4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Slc16a10Q3U9N9 512 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Tbc1d24Q3UUG6 561 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Defa17Q64016 82 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Serpina12Q7TMF5 413 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Olfr798Q7TRH8 311 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Olfr297Q7TS07 310 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Zbtb24Q80X44 710 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Q810S2 196 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Gpr158Q8C419 1200 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Scara3Q8C850 606 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Tmem221Q8K071 230 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 PolbQ8K409 335 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Olfr1467Q8VFW1 308 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Dhx36Q8VHK9 1001 aaKnown RBP4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Mapk8Q91Y86 384 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Tjp3Q9QXY1 905 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Bmp15Q9Z0L4 392 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Sult2a7A0A1B0GRF0 313 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Klhl32A2AJX0 620 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Srpk1O70551 648 aaKnown RBP4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 C2P21180 760 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 LynP25911 512 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 RxrbP28704 520 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Mmp20P57748 482 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Chi3l1Q61362 389 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 E2f5Q61502 335 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Scube1Q6NZL8 1018 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Orai3Q6P8G8 290 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Celf4Q7TSY6 486 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Znf569Q80W31 679 aa4.62□□□□□ -1.67
Prkdc-201ENSMUST00000023352 Them6Q80ZW2 207 aa4.62□□□□□ -1.67
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms