RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Nde1Q9CZA6 344 aa20.76■□□□□ 0.91
Trim47-201ENSMUST00000021120 Gsdmdc1Q9D8T2 487 aa20.76■□□□□ 0.91
Trim47-201ENSMUST00000021120 Ap2b1Q9DBG3 937 aa20.76■□□□□ 0.91
Trim47-201ENSMUST00000021120 Dcaf6Q9DC22 876 aa20.76■□□□□ 0.91
Trim47-201ENSMUST00000021120 Scamp5Q9JKD3 235 aa20.76■□□□□ 0.91
Trim47-201ENSMUST00000021120 Ism1A2ATD1 454 aa20.76■□□□□ 0.91
Trim47-201ENSMUST00000021120 Gm10722F6VLK5 217 aa20.76■□□□□ 0.91
Trim47-201ENSMUST00000021120 Pcsk6F6XJP7 959 aa20.76■□□□□ 0.91
Trim47-201ENSMUST00000021120 SftpbP50405 377 aa20.76■□□□□ 0.91
Trim47-201ENSMUST00000021120 Eif3eP60229 445 aaKnown RBP20.76■□□□□ 0.91
Trim47-201ENSMUST00000021120 Itga11P61622 1188 aa20.76■□□□□ 0.91
Trim47-201ENSMUST00000021120 Cldn11Q60771 207 aa20.76■□□□□ 0.91
Trim47-201ENSMUST00000021120 Cntn2Q61330 1040 aa20.76■□□□□ 0.91
Trim47-201ENSMUST00000021120 Tpp2Q64514 1262 aa20.76■□□□□ 0.91
Trim47-201ENSMUST00000021120 Atg16l1Q8C0J2 607 aa20.76■□□□□ 0.91
Trim47-201ENSMUST00000021120 Prpf39Q8K2Z2 665 aa20.76■□□□□ 0.91
Trim47-201ENSMUST00000021120 Lims2Q91XD2 341 aa20.76■□□□□ 0.91
Trim47-201ENSMUST00000021120 Pdk3Q922H2 415 aaKnown RBP20.76■□□□□ 0.91
Trim47-201ENSMUST00000021120 Taf11Q99JX1 211 aa20.76■□□□□ 0.91
Trim47-201ENSMUST00000021120 Nsmce3Q9CPR8 279 aa20.76■□□□□ 0.91
Trim47-201ENSMUST00000021120 Ndc80Q9D0F1 642 aaKnown RBP20.76■□□□□ 0.91
Trim47-201ENSMUST00000021120 Abcg8Q9DBM0 673 aa20.76■□□□□ 0.91
Trim47-201ENSMUST00000021120 Scyl1Q9EQC5 806 aaKnown RBP20.76■□□□□ 0.91
Trim47-201ENSMUST00000021120 PolhQ9JJN0 694 aa20.76■□□□□ 0.91
Trim47-201ENSMUST00000021120 Smarcb1Q9Z0H3 385 aa20.76■□□□□ 0.91
Trim47-201ENSMUST00000021120 Sept5Q9Z2Q6 369 aa20.76■□□□□ 0.91
Trim47-201ENSMUST00000021120 Rabgap1lA6H6A9 815 aa20.75■□□□□ 0.91
Trim47-201ENSMUST00000021120 Gm8882E9Q7E4 283 aa20.75■□□□□ 0.91
Trim47-201ENSMUST00000021120 Ptpn9O35239 593 aa20.75■□□□□ 0.91
Trim47-201ENSMUST00000021120 Per2O54943 1257 aa20.75■□□□□ 0.91
Trim47-201ENSMUST00000021120 Ap2a2P17427 938 aaKnown RBP20.75■□□□□ 0.91
Trim47-201ENSMUST00000021120 Tsta3P23591 321 aa20.75■□□□□ 0.91
Trim47-201ENSMUST00000021120 Resp18P47939 175 aa20.75■□□□□ 0.91
Trim47-201ENSMUST00000021120 B020004J07RikQ3UTC0 476 aa20.75■□□□□ 0.91
Trim47-201ENSMUST00000021120 Znf185Q62394 352 aa20.75■□□□□ 0.91
Trim47-201ENSMUST00000021120 Rab34Q64008 259 aa20.75■□□□□ 0.91
Trim47-201ENSMUST00000021120 Dusp16Q6PCP3 660 aa20.75■□□□□ 0.91
Trim47-201ENSMUST00000021120 Kctd12bQ8C7J6 292 aa20.75■□□□□ 0.91
Trim47-201ENSMUST00000021120 Trim61Q8JZK6 461 aa20.75■□□□□ 0.91
Trim47-201ENSMUST00000021120 Q8R1Y2 203 aa20.75■□□□□ 0.91
Trim47-201ENSMUST00000021120 Rsph1Q8VIG3 301 aa20.75■□□□□ 0.91
Trim47-201ENSMUST00000021120 Raver1Q9CW46 748 aaKnown RBP20.75■□□□□ 0.91
Trim47-201ENSMUST00000021120 LactbQ9EP89 551 aa20.75■□□□□ 0.91
Trim47-201ENSMUST00000021120 Rfc2Q9WUK4 349 aaKnown RBP20.75■□□□□ 0.91
Trim47-201ENSMUST00000021120 Ighv11-2A0A075B5R8 117 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 Ankfn1A0A140LIW7 1083 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 A930018M24RikB7ZMY3 218 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 Ccdc175E9PVB3 822 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 Apold1E9Q0X2 246 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 F6Y6L6 278 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 Hes2O54792 157 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 TertO70372 1122 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 SnnP61807 88 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 CkbQ04447 381 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 Myadml2Q08AU7 307 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 Zbtb48Q1H9T6 681 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 Mon1aQ6PDG8 556 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 Prrt3Q6PE13 971 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 Cand2Q6ZQ73 1235 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 CtbsQ8R242 366 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 MceeQ9D1I5 178 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 Batf3Q9D275 118 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 Mbd1Q9Z2E2 636 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 Arhgef37A1IGU4 676 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 Zbed6D2EAC2 980 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 C87414E9PWI7 475 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 Zc3h12bG3X9I7 835 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 Fgf18O89101 207 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 GsrP47791 500 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 Aff3P51827 1254 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 YwhagP61982 247 aaKnown RBP20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 SnrpaQ62189 287 aaKnown RBP20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 Rnf220Q6PDX6 566 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 PdhxQ8BKZ9 501 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 Slco2b1Q8BXB6 683 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 Tfb1mQ8JZM0 345 aaKnown RBP20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 Il36gQ8R460 164 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 Pomgnt1Q91X88 660 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 Oma1Q9D8H7 521 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 C1qtnf1Q9QXP7 281 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 NumbQ9QZS3 653 aa20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 Top3bQ9Z321 862 aaKnown RBP20.74■□□□□ 0.91
Trim47-201ENSMUST00000021120 Gm20721E9Q2U8 318 aa20.73■□□□□ 0.91
Trim47-201ENSMUST00000021120 Vmn2r111K7N674 857 aa20.73■□□□□ 0.91
Trim47-201ENSMUST00000021120 P01631 113 aa20.73■□□□□ 0.91
Trim47-201ENSMUST00000021120 Cdk7Q03147 346 aa20.73■□□□□ 0.91
Trim47-201ENSMUST00000021120 Grb7Q03160 535 aa20.73■□□□□ 0.91
Trim47-201ENSMUST00000021120 PomkQ3TUA9 349 aa20.73■□□□□ 0.91
Trim47-201ENSMUST00000021120 March9Q3TZ87 348 aa20.73■□□□□ 0.91
Trim47-201ENSMUST00000021120 Nrg1Q6DR99 700 aa20.73■□□□□ 0.91
Trim47-201ENSMUST00000021120 Cacna2d2Q6PHS9 1154 aa20.73■□□□□ 0.91
Trim47-201ENSMUST00000021120 Il17rbQ9JIP3 499 aa20.73■□□□□ 0.91
Trim47-201ENSMUST00000021120 Ror1Q9Z139 937 aa20.73■□□□□ 0.91
Trim47-201ENSMUST00000021120 Serpinb9O08797 374 aa20.73■□□□□ 0.91
Trim47-201ENSMUST00000021120 Prim2P33610 505 aa20.73■□□□□ 0.91
Trim47-201ENSMUST00000021120 Hrh2P97292 397 aa20.73■□□□□ 0.91
Trim47-201ENSMUST00000021120 Sec1P97353 368 aa20.73■□□□□ 0.91
Trim47-201ENSMUST00000021120 Hmgb4Q6P8W9 181 aa20.73■□□□□ 0.91
Trim47-201ENSMUST00000021120 Tas2r115Q7M719 310 aa20.73■□□□□ 0.91
Trim47-201ENSMUST00000021120 Lrch3Q8BVU0 778 aa20.73■□□□□ 0.91
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms