RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Gpsm2Q8VDU0 679 aa12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Mtmr4Q91XS1 1190 aa12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Pdia6Q922R8 440 aaKnown RBP12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Pcyox1Q9CQF9 505 aa12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Emc2Q9CRD2 297 aa12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Fam212aQ9CX62 282 aa12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Paqr5Q9DCU0 330 aa12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Lmtk2Q3TYD6 1471 aa12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Fam83cA2ARK0 776 aa12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Fam155bA2BDP1 471 aa12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Gm13128L7MU96 475 aa12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Sod3O09164 251 aa12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 DgkaO88673 730 aa12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 BpgmP15327 259 aa12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Ndufs6P52503 116 aa12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 ZufspQ3T9Z9 577 aa12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Coq10bQ3THF9 240 aa12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Scnn1aQ61180 699 aa12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Gpr151Q7TSN6 422 aa12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Lrrc27Q80YS5 523 aa12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Tgm6Q8BM11 706 aa12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Dlgap5Q8K4R9 808 aa12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Serpinb1bQ8VHP7 382 aa12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Ndufaf7Q9CWG8 436 aa12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Tob2Q9JM55 345 aa12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Acsl4Q9QUJ7 711 aa12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Mid2Q9QUS6 705 aa12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Kdm5aQ3UXZ9 1690 aa12.39□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 FaahO08914 579 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Arl6O88848 186 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Akap3O88987 864 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Slc11a2P49282 568 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Itga4Q00651 1039 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Mthfd1lQ3V3R1 977 aaKnown RBP12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 CltbQ6IRU5 229 aaKnown RBP12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Ttc29Q80VM3 471 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Tbx10Q810F8 385 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 D630039A03RikQ8K0M7 236 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Med24Q99K74 987 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Gria4Q9Z2W8 902 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Gm5751A2AHC8 147 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Nfx1B1AY10 1114 aaKnown RBP12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Zfp563B8JJZ9 448 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Esp34G3UXG0 151 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Mybpc3O70468 1270 aaKnown RBP12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Chst3O88199 472 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Fam83hQ148V8 1209 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Tmem237Q3V0J1 427 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Slc9b2Q5BKR2 547 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Nr0b1Q61066 472 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Pick1Q62083 416 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Sh3rf1Q69ZI1 892 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Gabbr2Q80T41 940 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Ugt2a1Q80X89 528 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Gpr158Q8C419 1200 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Zmynd11Q8R5C8 602 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Usp26Q99MX1 835 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 KlbQ99N32 1043 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 SelenosQ9BCZ4 190 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Syvn1Q9DBY1 612 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 PllpQ9DCU2 182 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Ulk2Q9QY01 1037 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Zfyve9A2A8R0 1397 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Mfsd13bA0A1L1SUA2 455 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 CaskO70589 926 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Nr5a2P45448 560 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Fitm2P59266 262 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Cdh6P97326 790 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Ampd1Q3V1D3 745 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Ccdc85aQ5SP85 500 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Mief1Q8BGV8 463 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Thop1Q8C1A5 687 aaKnown RBP12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Kbtbd13Q8C828 458 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Ccdc17Q8CE13 565 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Dmtf1Q8CE22 761 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Acsf2Q8VCW8 615 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Scd3Q99PL7 359 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Cntd1Q9D995 334 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Rad18Q9QXK2 509 aaKnown RBP12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Fkbp9Q9Z247 570 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Slc6a16A0A1L1SR47 742 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Slfn3A0A1L1STQ7 640 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Rap1gapA2ALS5 663 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Olfr1040A2ARY1 313 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Nipsnap3aB1AWZ3 247 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Cyp2a22B2RXZ2 492 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Glyatl3E9Q5L8 290 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Gm6337K7N6X9 211 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Gm3115L7N285 211 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Ebf2O08792 575 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Cd151O35566 253 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Ntrk1Q3UFB7 799 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Ubtfl1Q3USZ2 394 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Q8BGA7 448 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Styxl1Q9DAR2 321 aa12.38□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 AurkbO70126 345 aa12.37□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Irf8P23611 424 aa12.37□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 TecP24604 630 aa12.37□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Jak1P52332 1153 aa12.37□□□□□ -0.43
Pcdhac1-201ENSMUST00000007584 Nudt2P56380 147 aa12.37□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms