RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 PHF7Q9BWX1 381 aaPredicted RBP8.97□□□□□ -0.97
HLA-B-258ENST00000640615 EPHX3Q9H6B9 360 aa8.97□□□□□ -0.97
HLA-B-258ENST00000640615 SP110Q9HB58 689 aa8.97□□□□□ -0.97
HLA-B-258ENST00000640615 USP29Q9HBJ7 922 aa8.97□□□□□ -0.97
HLA-B-258ENST00000640615 ATP13A1Q9HD20 1204 aa8.97□□□□□ -0.97
HLA-B-258ENST00000640615 MARK1Q9P0L2 795 aa8.97□□□□□ -0.97
HLA-B-258ENST00000640615 LIMD1Q9UGP4 676 aa8.97□□□□□ -0.97
HLA-B-258ENST00000640615 IPO11Q9UI26 975 aaKnown RBP8.97□□□□□ -0.97
HLA-B-258ENST00000640615 VPS28Q9UK41 221 aa8.97□□□□□ -0.97
HLA-B-258ENST00000640615 CLEC4EQ9ULY5 219 aa8.97□□□□□ -0.97
HLA-B-258ENST00000640615 HPCAL4Q9UM19 191 aa8.97□□□□□ -0.97
HLA-B-258ENST00000640615 DENND4CQ5VZ89 1909 aa8.96□□□□□ -0.97
HLA-B-258ENST00000640615 J3KR12 359 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 KCNK1O00180 336 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 CBX4O00257 560 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 MATN3O15232 486 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 CHADO15335 359 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 HOXC11O43248 304 aaPredicted RBP8.96□□□□□ -0.98
HLA-B-258ENST00000640615 KDELR3O43731 214 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 MAFKO60675 156 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 ZNF189O75820 626 aaPredicted RBP8.96□□□□□ -0.98
HLA-B-258ENST00000640615 JCHAINP01591 159 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 ZSCAN5DPP0CG00 497 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 VAV1P15498 845 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 CD70P32970 193 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 ACTN2P35609 894 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 ETFBP38117 255 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 VPS41P49754 854 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 CLCN6P51797 869 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 GDF10P55107 478 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 GUCY2DQ02846 1103 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 ZNF33AQ06730 810 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 SERINC3Q13530 473 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 RUNX3Q13761 415 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 SMAD2Q15796 467 aaKnown RBP8.96□□□□□ -0.98
HLA-B-258ENST00000640615 ERCC6LQ2NKX8 1250 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 PUS10Q3MIT2 529 aaKnown RBP8.96□□□□□ -0.98
HLA-B-258ENST00000640615 FAM182AQ5T1J6 154 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 LEKR1Q6ZMV7 388 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 PLCD3Q8N3E9 789 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 ZNF557Q8N988 423 aaPredicted RBP8.96□□□□□ -0.98
HLA-B-258ENST00000640615 MYRIPQ8NFW9 859 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 CCDC110Q8TBZ0 833 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 USP33Q8TEY7 942 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 NSMCE1Q8WV22 266 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 SLCO2A1Q92959 643 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 XPO6Q96QU8 1125 aaKnown RBP8.96□□□□□ -0.98
HLA-B-258ENST00000640615 ERP44Q9BS26 406 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 FEM1AQ9BSK4 669 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 ACE2Q9BYF1 805 aaPredicted RBP8.96□□□□□ -0.98
HLA-B-258ENST00000640615 CEP41Q9BYV8 373 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 TRIM31Q9BZY9 425 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 RAB17Q9H0T7 212 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 EPC1Q9H2F5 836 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 BRD9Q9H8M2 597 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 ECT2Q9H8V3 914 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 CD320Q9NPF0 282 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 HPS4Q9NQG7 708 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 ABCB8Q9NUT2 735 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 ASIC3Q9UHC3 531 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 FAM50BQ9Y247 325 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 UTP11Q9Y3A2 253 aaKnown RBP8.96□□□□□ -0.98
HLA-B-258ENST00000640615 BRWD1Q9NSI6 2320 aa8.96□□□□□ -0.98
HLA-B-258ENST00000640615 C5orf60A6NFR6 353 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 OTOL1A6NHN0 477 aaPredicted RBP8.95□□□□□ -0.98
HLA-B-258ENST00000640615 RNF103O00237 685 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 MTSS1O43312 755 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 SNAP91O60641 907 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 PRAMEF11O60813 436 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 GCATO75600 419 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 NEBLO76041 1014 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 HEXIM1O94992 359 aaKnown RBP8.95□□□□□ -0.98
HLA-B-258ENST00000640615 PABPC1P11940 636 aaKnown RBP8.95□□□□□ -0.98
HLA-B-258ENST00000640615 CCNB1P14635 433 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 IL9P15248 144 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 GLDCP23378 1020 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 PTPN3P26045 913 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 RPL22P35268 128 aaKnown RBP8.95□□□□□ -0.98
HLA-B-258ENST00000640615 ADCY8P40145 1251 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 TERF1P54274 439 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 NRLP54845 237 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 IL10RBQ08334 325 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 WASHC5Q12768 1159 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 GPS1Q13098 491 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 SLC12A1Q13621 1099 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 PTK6Q13882 451 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 NAA30Q147X3 362 aaPredicted RBP8.95□□□□□ -0.98
HLA-B-258ENST00000640615 ITPRIPL2Q3MIP1 535 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 RNF43Q68DV7 783 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 ASTLQ6HA08 431 aaPredicted RBP8.95□□□□□ -0.98
HLA-B-258ENST00000640615 ARHGEF18Q6ZSZ5 1173 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 PID1Q7Z2X4 250 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 APCDD1Q8J025 514 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 TAB3Q8N5C8 712 aaPredicted RBP8.95□□□□□ -0.98
HLA-B-258ENST00000640615 GLIS1Q8NBF1 620 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 CCHCR1Q8TD31 782 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 CSGALNACT1Q8TDX6 532 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 RTP4Q96DX8 246 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 FAM122AQ96E09 287 aa8.95□□□□□ -0.98
HLA-B-258ENST00000640615 ALG14Q96F25 216 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms