RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 ENPP1P22413 925 aa11.77□□□□□ -0.53
CLN6-217ENST00000636964 SEMA3BQ13214 749 aa11.77□□□□□ -0.53
CLN6-217ENST00000636964 PKN2Q16513 984 aaKnown RBP11.77□□□□□ -0.53
CLN6-217ENST00000636964 PRSS55Q6UWB4 352 aaPredicted RBP11.77□□□□□ -0.53
CLN6-217ENST00000636964 SLC39A5Q6ZMH5 540 aa11.77□□□□□ -0.53
CLN6-217ENST00000636964 BCL7CQ8WUZ0 217 aaPredicted RBP11.77□□□□□ -0.53
CLN6-217ENST00000636964 MIPEPQ99797 713 aa11.77□□□□□ -0.53
CLN6-217ENST00000636964 CRISPLD1Q9H336 500 aa11.77□□□□□ -0.53
CLN6-217ENST00000636964 ELAC1Q9H777 363 aaKnown RBP11.77□□□□□ -0.53
CLN6-217ENST00000636964 OGDHLQ9ULD0 1010 aa11.77□□□□□ -0.53
CLN6-217ENST00000636964 TCEA3O75764 348 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 CBX6O95503 412 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 GALTP07902 379 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 FUT10Q6P4F1 479 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 KBTBD2Q8IY47 623 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 COLGALT1Q8NBJ5 622 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 SEPT5Q99719 369 aaPredicted RBP11.76□□□□□ -0.53
CLN6-217ENST00000636964 PNPLA8Q9NP80 782 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 AASDHPPTQ9NRN7 309 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 ABCC13Q9NSE7 274 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 PCDHB5Q9Y5E4 795 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 PTPRDP23468 1912 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 SPAG7O75391 227 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 TBX18O95935 607 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 KRT15P19012 456 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 SCAPQ12770 1279 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 MGAT5BQ3V5L5 792 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 AGAP9Q5VTM2 703 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 NPAS4Q8IUM7 802 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 MPP5Q8N3R9 675 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 SMYD1Q8NB12 490 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 RRN3Q9NYV6 651 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 PAIP2BQ9ULR5 123 aaKnown RBP11.76□□□□□ -0.53
CLN6-217ENST00000636964 ATP11BQ9Y2G3 1177 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 ZNF510Q9Y2H8 683 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 MAD1L1Q9Y6D9 718 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 SYN3O14994 580 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 COL6A1P12109 1028 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 RPL17P18621 184 aaKnown RBP11.76□□□□□ -0.53
CLN6-217ENST00000636964 OLIG2Q13516 323 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 PAFAH1B3Q15102 231 aaKnown RBP11.76□□□□□ -0.53
CLN6-217ENST00000636964 PDK1Q15118 436 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 NFE2Q16621 373 aaPredicted RBP11.76□□□□□ -0.53
CLN6-217ENST00000636964 IRGCQ6NXR0 463 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 RNF19BQ6ZMZ0 732 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 PID1Q7Z2X4 250 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 NUP93Q8N1F7 819 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 PDCD7Q8N8D1 485 aaKnown RBP11.76□□□□□ -0.53
CLN6-217ENST00000636964 MAML1Q92585 1016 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 GATA6Q92908 595 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 EURLQ9NYK6 297 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 TEX264Q9Y6I9 313 aa11.76□□□□□ -0.53
CLN6-217ENST00000636964 A0A0A0MRY4 1105 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 A0A1W2PPM1 405 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 C2CD2LO14523 706 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 IRAK2O43187 625 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 PAGE1O75459 146 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 CSPG5O95196 566 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 PHBP35232 272 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 CRADDP78560 199 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 WASHC5Q12768 1159 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 SPARCL1Q14515 664 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 SMAD1Q15797 465 aaKnown RBP11.75□□□□□ -0.53
CLN6-217ENST00000636964 ZNF567Q8N184 647 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 C4orf33Q8N1A6 199 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 SPATA13Q96N96 652 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 RAB3IPQ96QF0 476 aaPredicted RBP11.75□□□□□ -0.53
CLN6-217ENST00000636964 DDX50Q9BQ39 737 aaKnown RBP11.75□□□□□ -0.53
CLN6-217ENST00000636964 GMIPQ9P107 970 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 FUT4P22083 530 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 PSMB4P28070 264 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 ATP5DP30049 168 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 MNX1P50219 401 aaPredicted RBP11.75□□□□□ -0.53
CLN6-217ENST00000636964 WDR4P57081 412 aaKnown RBP11.75□□□□□ -0.53
CLN6-217ENST00000636964 DUSP4Q13115 394 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 RCN2Q14257 317 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 PRKD1Q15139 912 aaPredicted RBP11.75□□□□□ -0.53
CLN6-217ENST00000636964 PRPF39Q86UA1 669 aaKnown RBP11.75□□□□□ -0.53
CLN6-217ENST00000636964 CRIPAKQ8N1N5 446 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 GIPC2Q8TF65 315 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 LGALS13Q9UHV8 139 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 GRID1Q9ULK0 1009 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 SF3B1O75533 1304 aaKnown RBP eCLIP11.75□□□□□ -0.536e-9■■■■■ 118.2
CLN6-217ENST00000636964 TCRBV9S1A1TA0A576 114 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 HACD1B0YJ81 288 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 ADAM12O43184 909 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 AIF1P55008 147 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 INHBCP55103 352 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 GEMIN4P57678 1058 aaKnown RBP11.75□□□□□ -0.53
CLN6-217ENST00000636964 MRPL58Q14197 206 aaKnown RBP11.75□□□□□ -0.53
CLN6-217ENST00000636964 ZNF449Q6P9G9 518 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 PPP1R21Q6ZMI0 780 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 ZNF534Q76KX8 674 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 SLC7A5P1Q8MH63 180 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 PAFAH2Q99487 392 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 SLCO1B3Q9NPD5 702 aa11.75□□□□□ -0.53
CLN6-217ENST00000636964 NVLO15381 856 aaKnown RBP11.74□□□□□ -0.53
CLN6-217ENST00000636964 IGLV3-25P01717 112 aa11.74□□□□□ -0.53
CLN6-217ENST00000636964 FGFR3P22607 806 aa11.74□□□□□ -0.53
CLN6-217ENST00000636964 NUMBP49757 651 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms