RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 BNIPLQ7Z465 357 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 PDSS2Q86YH6 399 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 PPP2R3CQ969Q6 453 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 SLC2A13Q96QE2 648 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 GATA5Q9BWX5 397 aaPredicted RBP12.03□□□□□ -0.48
C11orf54-215ENST00000617482 WDR6Q9NNW5 1121 aaKnown RBP12.03□□□□□ -0.48
C11orf54-215ENST00000617482 CASS4Q9NQ75 786 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 DDIT4Q9NX09 232 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 RNF181Q9P0P0 153 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 PDP2Q9P2J9 529 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 SSX2IPQ9Y2D8 614 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 TIMM13Q9Y5L4 95 aaPredicted RBP12.03□□□□□ -0.48
C11orf54-215ENST00000617482 ZSWIM8A7E2V4 1837 aa12.03□□□□□ -0.48
C11orf54-215ENST00000617482 SF3B1O75533 1304 aaKnown RBP eCLIP12.03□□□□□ -0.48
C11orf54-215ENST00000617482 RRN3P2A6NIE6 340 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 TK2O00142 265 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 MPOP05164 745 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 USP17L7P0C7H9 530 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 CYP2B6P20813 491 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 MPSTP25325 297 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 NMBRP28336 390 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 EPHA3P29320 983 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 AVPR1AP37288 418 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 BTKQ06187 659 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 SNAPC2Q13487 334 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 TRIP10Q15642 601 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 PPM1LQ5SGD2 360 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 PRAMEF19Q5SWL8 479 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 PDZD4Q76G19 769 aaPredicted RBP12.02□□□□□ -0.48
C11orf54-215ENST00000617482 GPRIN1Q7Z2K8 1008 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 LIMS2Q7Z4I7 341 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 ADGRG6Q86SQ4 1221 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 CLEC14AQ86T13 490 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 EDEM1Q92611 657 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 ISL2Q96A47 359 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 CELF6Q96J87 481 aaKnown RBP12.02□□□□□ -0.48
C11orf54-215ENST00000617482 VPS39Q96JC1 886 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 ZFP42Q96MM3 310 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 APBA2Q99767 749 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 KLHL4Q9C0H6 718 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 DNAI2Q9GZS0 605 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 ILKAPQ9H0C8 392 aaPredicted RBP12.02□□□□□ -0.48
C11orf54-215ENST00000617482 TASP1Q9H6P5 420 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 TCF7L2Q9NQB0 619 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 BPTFQ12830 3046 aa12.02□□□□□ -0.48
C11orf54-215ENST00000617482 NRCAMQ92823 1304 aa12.02□□□□□ -0.49
C11orf54-215ENST00000617482 PHGDHO43175 533 aaKnown RBP12.02□□□□□ -0.49
C11orf54-215ENST00000617482 XPOTO43592 962 aaKnown RBP12.02□□□□□ -0.49
C11orf54-215ENST00000617482 JCHAINP01591 159 aa12.02□□□□□ -0.49
C11orf54-215ENST00000617482 WARSP23381 471 aaKnown RBP12.02□□□□□ -0.49
C11orf54-215ENST00000617482 MSX2P35548 267 aaPredicted RBP12.02□□□□□ -0.49
C11orf54-215ENST00000617482 PPIDQ08752 370 aaKnown RBP12.02□□□□□ -0.49
C11orf54-215ENST00000617482 MSLNQ13421 630 aaPredicted RBP12.02□□□□□ -0.49
C11orf54-215ENST00000617482 GRM3Q14832 879 aa12.02□□□□□ -0.49
C11orf54-215ENST00000617482 SNX17Q15036 470 aa12.02□□□□□ -0.49
C11orf54-215ENST00000617482 KCTD11Q693B1 232 aa12.02□□□□□ -0.49
C11orf54-215ENST00000617482 GBA3Q9H227 469 aa12.02□□□□□ -0.49
C11orf54-215ENST00000617482 FBXW11Q9UKB1 542 aa12.02□□□□□ -0.49
C11orf54-215ENST00000617482 IPPQ9Y573 584 aa12.02□□□□□ -0.49
C11orf54-215ENST00000617482 ZNF638Q14966 1978 aaKnown RBP12.02□□□□□ -0.49
C11orf54-215ENST00000617482 PDHXO00330 501 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 FAM200BP0CF97 657 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 KCNE1P15382 129 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 NUDT2P50583 147 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 DLG1Q12959 904 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 UBXN11Q5T124 520 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 OTOP3Q7RTS5 596 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 USP33Q8TEY7 942 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 SREK1Q8WXA9 508 aaKnown RBP12.01□□□□□ -0.49
C11orf54-215ENST00000617482 KCTD13Q8WZ19 329 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 JADE3Q92613 823 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 ACE2Q9BYF1 805 aaPredicted RBP12.01□□□□□ -0.49
C11orf54-215ENST00000617482 NUF2Q9BZD4 464 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 UNKQ9C0B0 810 aaKnown RBP12.01□□□□□ -0.49
C11orf54-215ENST00000617482 TMEM30AQ9NV96 361 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 OXSMQ9NWU1 459 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 TLK1Q9UKI8 766 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 TREHO43280 583 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 TIMM44O43615 452 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 YBX3P16989 372 aaKnown RBP eCLIP12.01□□□□□ -0.49
C11orf54-215ENST00000617482 GRIA4P48058 902 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 NAGLUP54802 743 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 MTTPP55157 894 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 SEMA3BQ13214 749 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 MED21Q13503 144 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 HNRNPDQ14103 355 aaKnown RBP12.01□□□□□ -0.49
C11orf54-215ENST00000617482 USP10Q14694 798 aaKnown RBP12.01□□□□□ -0.49
C11orf54-215ENST00000617482 LSM12Q3MHD2 195 aaKnown RBP12.01□□□□□ -0.49
C11orf54-215ENST00000617482 ARL13AQ5H913 290 aaPredicted RBP12.01□□□□□ -0.49
C11orf54-215ENST00000617482 RASIP1Q5U651 963 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 SNX32Q86XE0 403 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 SPATA6LQ8N4H0 392 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 TOP6BLQ8N6T0 577 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 LENG1Q96BZ8 264 aaPredicted RBP12.01□□□□□ -0.49
C11orf54-215ENST00000617482 SLC10A4Q96EP9 437 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 MAML3Q96JK9 1138 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 SCYL1Q96KG9 808 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 TRAPPC9Q96Q05 1148 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 RTKNQ9BST9 563 aa12.01□□□□□ -0.49
C11orf54-215ENST00000617482 CRTAC1Q9NQ79 661 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms