RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 VMP1Q96GC9 406 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 CCDC138Q96M89 665 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 CFAP53Q96M91 514 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 TIGD1Q96MW7 591 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 WDR83Q9BRX9 315 aaKnown RBP2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 PIMREGQ9BSJ6 248 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 ABHD14AQ9BUJ0 271 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 ELOVL1Q9BW60 279 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 HIPK2Q9H2X6 1198 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 CERS4Q9HA82 394 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 FZD3Q9NPG1 666 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 THSD1Q9NS62 852 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 GJB4Q9NTQ9 266 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 RRN3Q9NYV6 651 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 PCDHA12Q9UN75 941 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 SLC8A2Q9UPR5 921 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 RRP7AQ9Y3A4 280 aaKnown RBP2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 SYNRGQ9UMZ2 1314 aa2.87□□□□□ -1.95
HMGB1P24-202ENST00000615653 A0A0G2JK05 382 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 A0A1B0GVC2 190 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 DPPA5A6NC42 116 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 M0QZQ0 153 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 PCDH17O14917 1159 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 NKX2-8O15522 239 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 SMAD6O43541 496 aaKnown RBP2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 NPPBP16860 134 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 IGFBP2P18065 325 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 CAPN3P20807 821 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 ADD2P35612 726 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 DEKP35659 375 aaKnown RBP2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 CHKAP35790 457 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 UBA7P41226 1012 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 RAD52P43351 418 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 HTR6P50406 440 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 PGGT1BP53609 377 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 ALDH18A1P54886 795 aaKnown RBP2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 TNFAIP2Q03169 654 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 G3BP1Q13283 466 aaKnown RBP eCLIP2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 TAF12Q16514 161 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 MPEG1Q2M385 716 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 PRTGQ2VWP7 1150 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 RILPL1Q5EBL4 403 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 TTC39AQ5SRH9 613 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 ITPRIPL1Q6GPH6 555 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 DSTYKQ6XUX3 929 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 TRABD2AQ86V40 505 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 GATAD2AQ86YP4 633 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 DCP1BQ8IZD4 617 aaKnown RBP2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 CCAR2Q8N163 923 aaKnown RBP2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 ARL14EPQ8N8R7 260 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 DEPTORQ8TB45 409 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 SLC22A17Q8WUG5 538 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 USP13Q92995 863 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 GPR78Q96P69 363 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 SPAG5Q96R06 1193 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 CRB3Q9BUF7 120 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 MRPL9Q9BYD2 267 aaKnown RBP2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 OSBPL5Q9H0X9 879 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 TASP1Q9H6P5 420 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 FSCN3Q9NQT6 498 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 BLOC1S4Q9NUP1 217 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 ARGLU1Q9NWB6 273 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 SAGE1Q9NXZ1 904 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 NKIRAS2Q9NYR9 191 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 MSRB1Q9NZV6 116 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 PDP2Q9P2J9 529 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 SEL1LQ9UBV2 794 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 SLC39A10Q9ULF5 831 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 MAGED1Q9Y5V3 778 aaPredicted RBP2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 SNX5Q9Y5X3 404 aa2.86□□□□□ -1.95
HMGB1P24-202ENST00000615653 LOC105369274A0A096LPK9 316 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 LOC102723532A0A0G2JNH3 316 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 GAGE12JA6NER3 117 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 TSPY2A6NKD2 308 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 TRIM64CA6NLI5 447 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 B4DLN1 442 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 NCAM2O15394 837 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 PLOD3O60568 738 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 UGDHO60701 494 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 PLA2G6O60733 806 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 TAF5LO75529 589 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 CNTN5O94779 1100 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 NDUFB8O95169 186 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 LCKP06239 509 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 ANXA6P08133 673 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 FGF2P09038 288 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 RFPL3SP0C7P2 107 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 TSPY3P0CV98 308 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 TSPY8P0CW00 308 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 CDC25AP30304 524 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 ELF1P32519 619 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 SSR1P43307 286 aaKnown RBP2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 HSPA7P48741 367 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 MMP14P50281 582 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 TPD52P55327 224 aaPredicted RBP2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 TSPY1Q01534 308 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 ROR1Q01973 937 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 PGM5Q15124 567 aa2.85□□□□□ -1.95
HMGB1P24-202ENST00000615653 AAK1Q2M2I8 961 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms